RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 MCM3P25205 808 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 PSMA3P25788 255 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 NFKBIAP25963 317 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 NMBRP28336 390 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 ACSL1P33121 698 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 MAGEA4P43358 317 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 LIG3P49916 1009 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 ZNF140P52738 457 aaPredicted RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 STC1P52823 247 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 SEPT6Q14141 434 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 ARHGEF7Q14155 803 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 MAP7D1Q3KQU3 841 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 PCID2Q5JVF3 399 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 CASC4Q6P4E1 433 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 CES3Q6UWW8 571 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 GLT6D1Q7Z4J2 308 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 HSD11B1LQ7Z5J1 315 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 OR4K2Q8NGD2 314 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 RLN3Q8WXF3 142 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 LRRC39Q96DD0 335 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 STAMBPL1Q96FJ0 436 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 FCRL3Q96P31 734 aaPredicted RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 EBNA1BP2Q99848 306 aaKnown RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 WRAP53Q9BUR4 548 aaKnown RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 TXLNGYQ9BZA5 131 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 ZFYVE1Q9HBF4 777 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 PLAC1Q9HBJ0 212 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 MRM3Q9HC36 420 aaKnown RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 IL17CQ9P0M4 197 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 SLC2A6Q9UGQ3 507 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 SOX13Q9UN79 622 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 CYP8B1Q9UNU6 501 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 ZFR2Q9UPR6 939 aaKnown RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 CHMP2BQ9UQN3 213 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 INVSQ9Y283 1065 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 MAD1L1Q9Y6D9 718 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 PI4KAP42356 2102 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 IGHV1OR15-9A0A0B4J2B8 117 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 FAM237BA0A1B0GVD1 139 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 MAGEB16A2A368 324 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 PRR23AA6NEV1 266 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 IGLON5A6NGN9 336 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 GOLGA8CPA6NN73 597 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 C2orf81A6NN90 581 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 H0Y858 1186 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 CCL22O00626 93 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 AXIN1O15169 862 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 PCDH8O95206 1070 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 CRTAMO95727 393 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TUBBP07437 444 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ELFN1P0C7U0 828 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ZNF30P17039 623 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 BPIP17213 487 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 OXTRP30559 389 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 HMGCLP35914 325 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 SPINT3P49223 89 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 FNTBP49356 437 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ARSDP51689 593 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 CSTF1Q05048 431 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 ANKRD20A4Q4UJ75 823 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TMEM259Q4ZIN3 620 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 UBAP2Q5T6F2 1119 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 TSTD2Q5T7W7 516 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ARMC3Q5W041 872 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 SEL1L3Q68CR1 1132 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ESRP1Q6NXG1 681 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 Q6ZVL8 140 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TECPR1Q7Z6L1 1165 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TMEM135Q86UB9 458 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ZBED8Q8IZ13 594 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 OR13C4Q8NGS5 318 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 AENQ8WTP8 325 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 PYROXD1Q8WU10 500 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 STYXQ8WUJ0 223 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.53□□□□□ -0.88
RFFL-210ENST00000582308 MFSD3Q96ES6 412 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 CFAP36Q96G28 342 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TOE1Q96GM8 510 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 DNAJC1Q96KC8 554 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 C9orf72Q96LT7 481 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 COQ10AQ96MF6 247 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 BTBD1Q9H0C5 482 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TSPYL1Q9H0U9 437 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 SGK2Q9HBY8 427 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 PREBQ9HCU5 417 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 BPIFA1Q9NP55 256 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 TREX1Q9NSU2 369 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 NLE1Q9NVX2 485 aaPredicted RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 SAMD15Q9P1V8 674 aa9.53□□□□□ -0.88
RFFL-210ENST00000582308 ZC3H7BQ9UGR2 993 aaKnown RBP9.53□□□□□ -0.88
RFFL-210ENST00000582308 MBD1Q9UIS9 605 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms