RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 E7EVH7 732 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 KHNYNO15037 678 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 RIPK2O43353 540 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 OPHN1O60890 802 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 SPAG6O75602 509 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 GKP32189 559 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 DRD3P35462 400 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 STAT4Q14765 748 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 RNASEH2BQ5TBB1 312 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 FBXL19Q6PCT2 694 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 FAM124AQ86V42 546 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 RIBC1Q8N443 379 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 CNTD1Q8N815 330 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 RLN3Q8WXF3 142 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 ARRDC3Q96B67 414 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 TOE1Q96GM8 510 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 ATP6V1G3Q96LB4 118 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 SPATA13Q96N96 652 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 RBM15Q96T37 977 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■□□□□ 9.6
CSNK1D-220ENST00000581737 TMEM109Q9BVC6 243 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 SLC25A51Q9H1U9 297 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 CDC42EP4Q9H3Q1 356 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 GLOD4Q9HC38 313 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 FSCN3Q9NQT6 498 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 TMEM74BQ9NUR3 256 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 WSB2Q9NYS7 404 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 LHX6Q9UPM6 363 aa13.56□□□□□ -0.24
CSNK1D-220ENST00000581737 NUMA1Q14980 2115 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 THADAQ6YHU6 1953 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 C16orf96A6NNT2 1141 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 H3BQF6 201 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 GCATO75600 419 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PIGNO95427 931 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 SEMA4FO95754 770 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 TTC4O95801 387 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 SYF2O95926 243 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 ADRB3P13945 408 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 RPL22P35268 128 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 LMAN1P49257 510 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 ADPRHP54922 357 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CDK16Q00536 496 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 DSC2Q02487 901 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 RPL6Q02878 288 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 UAP1Q16222 522 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PIP5KL1Q5T9C9 394 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 ARMC12Q5T9G4 340 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 AGBL4Q5VU57 503 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PARS2Q7L3T8 475 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PID1Q7Z2X4 250 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 NDUFAF2Q8N183 169 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 ZNF567Q8N184 647 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CADM4Q8NFZ8 388 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 OR2T34Q8NGX1 318 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 OR14C36Q8NHC7 312 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PIGKQ92643 395 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 IMP4Q96G21 291 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CEP41Q9BYV8 373 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CENPHQ9H3R5 247 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 TMBIM4Q9HC24 238 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 PREBQ9HCU5 417 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 SERGEFQ9UGK8 458 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 RSPH14Q9UHP6 348 aa13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 FASNP49327 2511 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-220ENST00000581737 CEP192Q8TEP8 1941 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 C5orf60A6NFR6 353 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 UPK3BL1B0FP48 263 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 UPK3BL2E5RIL1 263 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 AGPSO00116 658 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 HTRA2O43464 458 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 PLRG1O43660 514 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 AP1G1O43747 822 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 CPP00450 1065 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 CAPNS1P04632 268 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 NFKB1P19838 968 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 TPSB2P20231 275 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 CD86P42081 329 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 MAGEA4P43358 317 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 DHPSP49366 369 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 METAP1P53582 386 aa13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 RPL26P61254 145 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-220ENST00000581737 ZNF844Q08AG5 666 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms