RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PTPRQQ9UMZ3 2332 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 A0A0U1RQS6 177 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 A0A1W2PNU3 283 aaPredicted RBP21.3■■□□□ 1
CSNK1D-215ENST00000580784 SSU72P8A0A1W2PR75 194 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 TNFRSF10CO14798 259 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 MATN3O15232 486 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 KRT7P08729 469 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 CYP2A6P11509 494 aaPredicted RBP21.3■■□□□ 1
CSNK1D-215ENST00000580784 NFKBIAP25963 317 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 TRIM14Q14142 442 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 IHHQ14623 411 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 Q6ZVL8 140 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 TAF8Q7Z7C8 310 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 TSPAN33Q86UF1 283 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 MAP7D3Q8IWC1 876 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 PQLC3Q8N755 202 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 PIH1D2Q8WWB5 315 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 MAML1Q92585 1016 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 SMIM14Q96QK8 99 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 MCCC1Q96RQ3 725 aaPredicted RBP21.3■■□□□ 1
CSNK1D-215ENST00000580784 CHP1Q99653 195 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 POLR1EQ9GZS1 481 aaKnown RBP21.3■■□□□ 1
CSNK1D-215ENST00000580784 TMEM168Q9H0V1 697 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 CYP4F12Q9HCS2 524 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 ZNHIT6Q9NWK9 470 aaKnown RBP21.3■■□□□ 1
CSNK1D-215ENST00000580784 SATB2Q9UPW6 733 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 PPIL1Q9Y3C6 166 aa21.3■■□□□ 1
CSNK1D-215ENST00000580784 ATRXP46100 2492 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 AKR1B10O60218 316 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 FZD6O60353 706 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 TCEA3O75764 348 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 TMEM253P0C7T8 217 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 CCNCP24863 283 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 GBE1Q04446 702 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 CCDC173Q0VFZ6 552 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 SLC10A2Q12908 348 aaPredicted RBP21.29■■□□□ 1
CSNK1D-215ENST00000580784 MESDQ14696 234 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
CSNK1D-215ENST00000580784 C3orf38Q5JPI3 329 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 ZFYVE27Q5T4F4 411 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 VSTM4Q8IW00 320 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 SFTPA2Q8IWL1 248 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 LSMEM2Q8N112 164 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 CCL4L1Q8NHW4 92 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 SLC35G2Q8TBE7 412 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 CCDC74AQ96AQ1 378 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 FAF2Q96CS3 445 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 DTD2Q96FN9 168 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 ZNF578Q96N58 590 aaPredicted RBP21.29■■□□□ 1
CSNK1D-215ENST00000580784 TSGA13Q96PP4 275 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 TSPY26PQ9H489 355 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 SYNDIG1Q9H7V2 258 aa21.29■■□□□ 1
CSNK1D-215ENST00000580784 RBM22Q9NW64 420 aaKnown RBP eCLIP21.29■■□□□ 15e-11■□□□□ 8.5
CSNK1D-215ENST00000580784 PDE2AO00408 941 aaPredicted RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 DXOO77932 396 aaKnown RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 MYCLP1P12525 358 aaPredicted RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 KDELR1P24390 212 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 DSC2Q02487 901 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 ARHGEF7Q14155 803 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 SPIDRQ14159 915 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 TSR1Q2NL82 804 aaKnown RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 SOWAHCQ53LP3 525 aaPredicted RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 TIGD7Q6NT04 549 aaPredicted RBP21.28■■□□□ 1
CSNK1D-215ENST00000580784 USP45Q70EL2 814 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 HEATR4Q86WZ0 1026 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 RNF214Q8ND24 703 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 FAM46DQ8NEK8 389 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 GPR156Q8NFN8 814 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 WDR48Q8TAF3 677 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 RAPGEF5Q92565 580 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 TEX101Q9BY14 249 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 ABHD10Q9NUJ1 306 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 SPTLC3Q9NUV7 552 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 KCTD5Q9NXV2 234 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 LCMT1Q9UIC8 334 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 BPTFQ12830 3046 aa21.28■■□□□ 1
CSNK1D-215ENST00000580784 PRSS38A1L453 326 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 PSMD11O00231 422 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 NTN3O00634 580 aaPredicted RBP21.27■■□□□ 1
CSNK1D-215ENST00000580784 FUCA1P04066 466 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 CEACAM5P06731 702 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 CCNB1P14635 433 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 MAN1A1P33908 653 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 PDX1P52945 283 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 OGFOD3Q6PK18 319 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 RFLNAQ6ZTI6 216 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 TECPR1Q7Z6L1 1165 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 FATE1Q969F0 183 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 GRAMD1AQ96CP6 724 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 NAF1Q96HR8 494 aaKnown RBP21.27■■□□□ 1
CSNK1D-215ENST00000580784 HIC2Q96JB3 615 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 RNF157Q96PX1 679 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 SUDS3Q9H7L9 328 aaPredicted RBP21.27■■□□□ 1
CSNK1D-215ENST00000580784 NHEJ1Q9H9Q4 299 aaPredicted RBP21.27■■□□□ 1
CSNK1D-215ENST00000580784 ASCL3Q9NQ33 180 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 PHPT1Q9NRX4 125 aaPredicted RBP21.27■■□□□ 1
CSNK1D-215ENST00000580784 TTLL3Q9Y4R7 772 aa21.27■■□□□ 1
CSNK1D-215ENST00000580784 PMS2P1A4D2B8 440 aa21.26■□□□□ 0.99
CSNK1D-215ENST00000580784 GOLGA6CA6NDK9 693 aa21.26■□□□□ 0.99
CSNK1D-215ENST00000580784 GOLGA6BA6NDN3 693 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms