RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 IGHV1OR21-1A0A087WYE8 117 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PRR19A6NJB7 356 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ECEL1O95672 775 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 EPHB2P29323 1055 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 C2CD6Q53TS8 623 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CAMK1DQ8IU85 385 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 UMODL1-AS1Q8N2C9 162 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 EMC1Q8N766 993 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CCL4L1Q8NHW4 92 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CENPIQ92674 756 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PMEPA1Q969W9 287 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 EXOC2Q96KP1 924 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NOL6Q9H6R4 1146 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PLEKHB1Q9UF11 243 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-216ENST00000579853 EFCAB7A8K855 629 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 WASH4PA8MWX3 477 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 BIN1O00499 593 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FGF10O15520 208 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TEX33O43247 280 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 VPS4BO75351 444 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PNMA6AP0CW24 399 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PRKAR1AP10644 381 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TCN2P20062 427 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NFKBIAP25963 317 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NOMO3P69849 1222 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 BCL2L1Q07817 233 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CYTH1Q15438 398 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 C15orf59Q2T9L4 293 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DEFB109BQ30KR1 87 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DPPA4Q7L190 304 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KDELC2Q7Z4H8 507 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SLFN11Q7Z7L1 901 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZNF677Q86XU0 584 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NRROSQ86YC3 692 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 STARD8Q92502 1023 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 AHCYL2Q96HN2 611 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LGR4Q9BXB1 951 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SPRY4Q9C004 299 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZMYND15Q9H091 742 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KLC2Q9H0B6 622 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FBXO8Q9NRD0 319 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 OCIAD1Q9NX40 245 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 VPS4AQ9UN37 437 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PCDHB3Q9Y5E6 796 aa12.21□□□□□ -0.45
CDK5RAP3-216ENST00000579853 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SETD2Q9BYW2 2564 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LOC101059948A0A1B0GTJ6 334 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 C2CD4BA6NLJ0 364 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MTSS1O43312 755 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DUX1O43812 170 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 BUB1BO60566 1050 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AGFG2O95081 481 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PRKCGP05129 697 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CEACAM5P06731 702 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 HTR7P34969 479 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AIF1P55008 147 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MC2RQ01718 297 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NSUN2Q08J23 767 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RALGDSQ12967 914 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ACOX1Q15067 660 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FHL5Q5TD97 284 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TAF3Q5VWG9 929 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SLC30A9Q6PML9 568 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SRLQ86TD4 932 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ZSWIM9Q86XI8 627 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NAGSQ8N159 534 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 BMPERQ8N8U9 685 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NETO2Q8NC67 525 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FAM172AQ8WUF8 416 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ECHDC3Q96DC8 303 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RTP4Q96DX8 246 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NUS1Q96E22 293 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TEX101Q9BY14 249 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AJAP1Q9UKB5 411 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TMEM184BQ9Y519 407 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CSMD1Q96PZ7 3565 aa12.2□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FBN2P35556 2912 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 A0A1W2PQ67 120 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PPM1DO15297 605 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PRAMEF11O60813 436 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 KRT3P12035 628 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MMP8P22894 467 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TEAD1P28347 426 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 346.5 ms