RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MAN1A1P33908 653 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 HDAC4P56524 1084 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 PER3P56645 1201 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 RALGDSQ12967 914 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 RETSATQ6NUM9 610 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 RHOT1Q8IXI2 618 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 NXPE1Q8N323 547 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
GGA3-206ENST00000578773 HMCESQ96FZ2 354 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 AHCYL2Q96HN2 611 aaKnown RBP11.04□□□□□ -0.64
GGA3-206ENST00000578773 OR6C1Q96RD1 312 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 LRRC27Q9C0I9 530 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 LHX9Q9NQ69 397 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 SUFUQ9UMX1 484 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 PCDHB4Q9Y5E5 795 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 CSPG4Q6UVK1 2322 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 PCM1Q15154 2024 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 FN1P02751 2386 aaKnown RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 ILVBLA1L0T0 632 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 KIAA1324LA8MWY0 1029 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 MASP2O00187 686 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 TNFRSF10CO14798 259 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 MAPK13O15264 365 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 RECQL5O94762 991 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 GSRP00390 522 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 KRT13P13646 458 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 CD99P14209 185 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 VARSP26640 1264 aaKnown RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 HTR1EP28566 365 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 CA5AP35218 305 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 MMP12P39900 470 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 SEPHS1P49903 392 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 GPLD1P80108 840 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 CDK17Q00537 523 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 GNA12Q03113 381 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 NFATC2Q13469 925 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 WDR74Q6RFH5 385 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 CUZD1Q86UP6 607 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 KCNMB4Q86W47 210 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 RASGRP3Q8IV61 690 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 ADAMTS17Q8TE56 1095 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 ISG20Q96AZ6 181 aaKnown RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 EXOC2Q96KP1 924 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 SMAD5Q99717 465 aaKnown RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 DPYSL5Q9BPU6 564 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 TBC1D10AQ9BXI6 508 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 BRD8Q9H0E9 1235 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 TKTL2Q9H0I9 626 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 ZBTB20Q9HC78 741 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 AJAP1Q9UKB5 411 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 PCDHGB7Q9Y5F8 929 aa11.03□□□□□ -0.64
GGA3-206ENST00000578773 PCYT1BQ9Y5K3 369 aaPredicted RBP11.03□□□□□ -0.64
GGA3-206ENST00000578773 COL6A5A8TX70 2615 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 IGLV3-10A0A075B6K4 115 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 PVALEFA0A1B0GWK0 134 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 SPAG6O75602 509 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 POP4O95707 220 aaKnown RBP11.02□□□□□ -0.65
GGA3-206ENST00000578773 PAEPP09466 180 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 SLC2A3P11169 496 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 TRIM23P36406 574 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 ADCY8P40145 1251 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 GARSP41250 739 aaKnown RBP11.02□□□□□ -0.65
GGA3-206ENST00000578773 ACTR1BP42025 376 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 STAT1P42224 750 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 GLRBP48167 497 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 ACTR1AP61163 376 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 AMPD3Q01432 767 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 ILF3Q12906 894 aaKnown RBP eCLIP11.02□□□□□ -0.65
GGA3-206ENST00000578773 ART3Q13508 389 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 AGERQ15109 404 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 CDSNQ15517 529 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 OR10G6Q8NH81 332 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 THAP4Q8WY91 577 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 SLC38A3Q99624 504 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.65
GGA3-206ENST00000578773 KLC2Q9H0B6 622 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 CUEDC2Q9H467 287 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 ACP6Q9NPH0 428 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 GPR83Q9NYM4 423 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 OGFRQ9NZT2 677 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 B3GNT3Q9Y2A9 372 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 PCDHGA10Q9Y5H3 936 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 CNTRLQ7Z7A1 2325 aa11.02□□□□□ -0.65
GGA3-206ENST00000578773 FAM170AA1A519 330 aa11.01□□□□□ -0.65
GGA3-206ENST00000578773 A8MX80 341 aa11.01□□□□□ -0.65
GGA3-206ENST00000578773 POLR2DO15514 142 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms