RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 TREX1Q9NSU2 369 aa12.96□□□□□ -0.33
CTC1-205ENST00000578537 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
CTC1-205ENST00000578537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.96□□□□□ -0.33
CTC1-205ENST00000578537 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
CTC1-205ENST00000578537 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
CTC1-205ENST00000578537 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
CTC1-205ENST00000578537 COQ6Q9Y2Z9 468 aa12.96□□□□□ -0.33
CTC1-205ENST00000578537 PIKFYVEQ9Y2I7 2098 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 C1orf232A0A0U1RR37 186 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 OR51F1A6NGY5 319 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 C10orf142B7Z368 130 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 GAPDHSO14556 408 aaPredicted RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 PIAS1O75925 651 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 DNTTP04053 509 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PRSS56P0CW18 603 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 SSTR1P30872 391 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 VIPR1P32241 457 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 ACSL1P33121 698 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 MAGEA4P43358 317 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 NPY2RP49146 381 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 TPMTP51580 245 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 STC1P52823 247 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 ADPRHP54922 357 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 TUBB4BP68371 445 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 TMPRSS15P98073 1019 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 FGL2Q14314 439 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 E2F5Q15329 346 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 TSTD2Q5T7W7 516 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 UNC5AQ6ZN44 842 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 USP45Q70EL2 814 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 CENPUQ71F23 418 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 GLT6D1Q7Z4J2 308 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 TTC7BQ86TV6 843 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PDIK1LQ8N165 341 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PELI3Q8N2H9 469 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 HCAR2Q8TDS4 363 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 FUBP1Q96AE4 644 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 ZNF669Q96BR6 464 aaPredicted RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 RANBP9Q96S59 729 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 BPIFA1Q9NP55 256 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 PRMT8Q9NR22 394 aaPredicted RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 BFARQ9NZS9 450 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 CYP8B1Q9UNU6 501 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 ZFR2Q9UPR6 939 aaKnown RBP12.95□□□□□ -0.34
CTC1-205ENST00000578537 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
CTC1-205ENST00000578537 FRYLO94915 3013 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 EIF3HO15372 352 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTC1-205ENST00000578537 PLRG1O43660 514 aaKnown RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 ATG13O75143 517 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 PTSQ03393 145 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 CRYMQ14894 314 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 TAF1AQ15573 450 aaPredicted RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 KYNUQ16719 465 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 TMEM52BQ4KMG9 183 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 DNAJC21Q5F1R6 531 aaKnown RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 CBARPQ8N350 705 aaPredicted RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 UHMK1Q8TAS1 419 aaKnown RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 CCDC97Q96F63 343 aaPredicted RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 OMDQ99983 421 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 FRMD8Q9BZ67 464 aaPredicted RBP12.94□□□□□ -0.34
CTC1-205ENST00000578537 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 IL22Q9GZX6 179 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 MAGEE1Q9HCI5 957 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 IL17CQ9P0M4 197 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 FKBPLQ9UIM3 349 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
CTC1-205ENST00000578537 IGHV1OR15-9A0A0B4J2B8 117 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 NDC80O14777 642 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 MMP20O60882 483 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 RNASEH1O60930 286 aaKnown RBP12.93□□□□□ -0.34
CTC1-205ENST00000578537 PAPSS2O95340 614 aaPredicted RBP12.93□□□□□ -0.34
CTC1-205ENST00000578537 APBB3O95704 486 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 IGLV3-19P01714 112 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 C6P13671 934 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 BPIP17213 487 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 PGAM1P18669 254 aa12.93□□□□□ -0.34
CTC1-205ENST00000578537 BCKDHBP21953 392 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms