RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NR1D2Q14995 579 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 ZNF284Q2VY69 593 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 CAND1Q86VP6 1230 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 PGAM4Q8N0Y7 254 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 ADCY4Q8NFM4 1077 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MIEF1Q9NQG6 463 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 GMIPQ9P107 970 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 RBPJLQ9UBG7 517 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TMCC3Q9ULS5 477 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 DUSP12Q9UNI6 340 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TP73O15350 636 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SPATA31D3P0C874 917 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SLC1A2P43004 574 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 YAP1P46937 504 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 DAOAP59103 153 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 DPYSL2Q16555 572 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 HIST2H2ACQ16777 129 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 HIST2H2AA3Q6FI13 130 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SPATA31D4Q6ZUB0 917 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TP53INP2Q8IXH6 220 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TWIST2Q8WVJ9 160 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MRPS26Q9BYN8 205 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 ATRNL1Q5VV63 1379 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TRMUO75648 421 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 SLC22A3O75751 556 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 CNPP09543 421 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 MSH3P20585 1137 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 CRYBB1P53674 252 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 PFKPQ01813 784 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TARBP2Q15633 366 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ZYG11AQ6WRX3 759 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ANKRD46Q86W74 232 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TOP6BLQ8N6T0 577 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 MIPEPQ99797 713 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 SPATA16Q9BXB7 569 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 FAM126AQ9BYI3 521 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 DNAJC28Q9NX36 388 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 H2AFY2Q9P0M6 372 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ZDHHC2Q9UIJ5 367 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 RGS14O43566 566 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 MTHFD1P11586 935 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 COX7A2P14406 83 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ITGAXP20702 1163 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ALDH4A1P30038 563 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TSNQ15631 228 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 SFT2D3Q587I9 215 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 IL23RQ5VWK5 629 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 METTL21CQ5VZV1 264 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 FBXO27Q8NI29 283 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 SLC39A8Q9C0K1 460 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 CACNA2D2Q9NY47 1150 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 LNPEPQ9UIQ6 1025 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 FZD10Q9ULW2 581 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ZBTB14O43829 449 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 KCNH1O95259 989 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 POLD2P49005 469 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 CCR3P51677 355 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 MOGSQ13724 837 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 GLYATQ6IB77 296 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 ZCCHC8Q6NZY4 707 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
ERBB2-206ENST00000578373 OR7A2PQ8NGA2 310 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 TMEM159Q96B96 161 aa12.04□□□□□ -0.48
ERBB2-206ENST00000578373 NRP1O14786 923 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 PIP5K1BO14986 540 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 CAMK2GQ13555 558 aaPredicted RBP12.03□□□□□ -0.48
ERBB2-206ENST00000578373 OLFML1Q6UWY5 402 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 RDH11Q8TC12 318 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 MCOLN3Q8TDD5 553 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 OR52E6Q96RD3 313 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 FBRSL1Q9HCM7 1045 aaKnown RBP12.03□□□□□ -0.48
ERBB2-206ENST00000578373 TDRKHQ9Y2W6 561 aaKnown RBP12.03□□□□□ -0.48
ERBB2-206ENST00000578373 BTBD19C9JJ37 291 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 E9PAM4 449 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 LIN7AO14910 233 aaPredicted RBP12.03□□□□□ -0.48
ERBB2-206ENST00000578373 SERPINI2O75830 405 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 OR6B1O95007 311 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 PBX3P40426 434 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 CRATP43155 626 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 CCL23P55773 120 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 MAB21L3Q8N8X9 362 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 PSMA8Q8TAA3 256 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 FAM81AQ8TBF8 368 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 CANT1Q8WVQ1 401 aa12.03□□□□□ -0.48
ERBB2-206ENST00000578373 TSEN34Q9BSV6 310 aaKnown RBP12.03□□□□□ -0.48
ERBB2-206ENST00000578373 ACAT2Q9BWD1 397 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms