RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 XPAP23025 273 aaPredicted RBP15.18■□□□□ 0.02
RAB40B-203ENST00000570676 SERPINA4P29622 427 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 THOP1P52888 689 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 SEMG2Q02383 582 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 SLC10A7Q0GE19 358 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 TARDBPQ13148 414 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■■■■□ 24.8
RAB40B-203ENST00000570676 KLF1Q13351 362 aaPredicted RBP15.18■□□□□ 0.02
RAB40B-203ENST00000570676 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
RAB40B-203ENST00000570676 WHAMMP3Q1A5X7 153 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 WSCD2Q2TBF2 565 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 NCBP2-AS2Q69YL0 99 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 PHACTR4Q8IZ21 702 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 CACTIN-AS1Q8N1I8 211 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 PLD5Q8N7P1 536 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 NXPE2Q96DL1 559 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 ZNF599Q96NL3 588 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 PSKH2Q96QS6 385 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 LRRC61Q9BV99 259 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 APOBEC3BQ9UH17 382 aaKnown RBP15.18■□□□□ 0.02
RAB40B-203ENST00000570676 MRFAP1Q9Y605 127 aa15.18■□□□□ 0.02
RAB40B-203ENST00000570676 KNTC1P50748 2209 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 CHD6Q8TD26 2715 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 PDE2AO00408 941 aaPredicted RBP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 TOR1BO14657 336 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 GM2AP17900 193 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 CR2P20023 1033 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 TGM2P21980 687 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 AP1S1P61966 158 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 PTK2BQ14289 1009 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 PAFAH1B3Q15102 231 aaKnown RBP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 CFAP58Q5T655 872 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 ZCCHC8Q6NZY4 707 aaKnown RBP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 ERAP2Q6P179 960 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 NPNTQ6UXI9 565 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 PGBD5Q8N414 524 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 HAUS1Q96CS2 278 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 TBATAQ96M53 351 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 RRAGDQ9NQL2 400 aaPredicted RBP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 SEPT3Q9UH03 358 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 ANKRD11Q6UB99 2663 aaPredicted RBP15.17■□□□□ 0.02
RAB40B-203ENST00000570676 CFAP47Q6ZTR5 3102 aa15.17■□□□□ 0.02
RAB40B-203ENST00000570676 ZZEF1O43149 2961 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 ASXL3Q9C0F0 2248 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 APOC4-APOC2K7ER74 178 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 MFSD11O43934 449 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 MAFKO60675 156 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 GCATO75600 419 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 APOC2P02655 101 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 GP1BAP07359 652 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 PECAM1P16284 738 aaPredicted RBP15.16■□□□□ 0.02
RAB40B-203ENST00000570676 SERPINB6P35237 376 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 LIG3P49916 1009 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 SCNN1BP51168 640 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 GBE1Q04446 702 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
RAB40B-203ENST00000570676 BCL2L1Q07817 233 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 RTP5Q14D33 572 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 LRRC14Q15048 493 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 DEFB133Q30KQ1 61 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 CDCP2Q5VXM1 449 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 DPPA4Q7L190 304 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 LMX1AQ8TE12 382 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 BTN2A2Q8WVV5 523 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 P3H4Q92791 437 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 NRSN2Q9GZP1 204 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 SAE1Q9UBE0 346 aaPredicted RBP15.16■□□□□ 0.02
RAB40B-203ENST00000570676 SPASTQ9UBP0 616 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 CLCA2Q9UQC9 943 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
RAB40B-203ENST00000570676 FREM2Q5SZK8 3169 aa15.16■□□□□ 0.02
RAB40B-203ENST00000570676 RP1P56715 2156 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 TTC24A2A3L6 582 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 TPP1O14773 563 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 HTRA2O43464 458 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 OPA1O60313 960 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 MAP3K6O95382 1288 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 MT-CO3P00414 261 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 CELA2BP08218 269 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 HSPA9P38646 679 aaKnown RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 RENBPP51606 427 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 E2F1Q01094 437 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 OTUD4Q01804 1114 aaKnown RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 SLC10A2Q12908 348 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 ZNF235Q14590 738 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 NFATC4Q14934 902 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 SIX1Q15475 284 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-203ENST00000570676 PRRT3Q5FWE3 981 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 LIPIQ6XZB0 460 aa15.15■□□□□ 0.02
RAB40B-203ENST00000570676 ATPAF2Q8N5M1 289 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms