RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 ALG11Q2TAA5 492 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 DEFB133Q30KQ1 61 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 PRRT3Q5FWE3 981 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 LRRC66Q68CR7 880 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 KCTD16Q68DU8 428 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 PNCKQ6P2M8 343 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 CRTC1Q6UUV9 634 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 CCNI2Q6ZMN8 369 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-220ENST00000569916 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 RCOR2Q8IZ40 523 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 NDUFAF2Q8N183 169 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 GALNT15Q8N3T1 639 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 LRRC57Q8N9N7 239 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 LPCAT1Q8NF37 534 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 TSACCQ96A04 125 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-220ENST00000569916 APOLD1Q96LR9 279 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 WDR92Q96MX6 357 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 DESI2Q9BSY9 194 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 DUSP23Q9BVJ7 150 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 CLPBQ9H078 707 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 PCDH9Q9HC56 1237 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 KCTD5Q9NXV2 234 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 SEPT10Q9P0V9 454 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 SPASTQ9UBP0 616 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 KLQ9UEF7 1012 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 GRID2IPA4D2P6 1211 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TMEM202A6NGA9 273 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CACNB4O00305 520 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 RASGRP1O95267 797 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 PROS1P07225 676 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 HOXC4P09017 264 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CDK4P11802 303 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CKMT1AP12532 417 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TSHRP16473 764 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 ZNF30P17039 623 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 PTPN3P26045 913 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CTNNA2P26232 953 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 BLKP51451 505 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 NAP1L1P55209 391 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 CLDN6P56747 220 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 RPL26P61254 145 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 ILKQ13418 452 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 C1orf61Q13536 156 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TEX44Q53QW1 395 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 ZCCHC8Q6NZY4 707 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 RFLNAQ6ZTI6 216 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 Q6ZVL8 140 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TECPR1Q7Z6L1 1165 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 HID1Q8IV36 788 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 FAM181AQ8N9Y4 354 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 ATL2Q8NHH9 583 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 P3H4Q92791 437 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 HAUS1Q96CS2 278 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 IMP4Q96G21 291 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 PDXPQ96GD0 296 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 LYSMD1Q96S90 227 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 RBM15Q96T37 977 aaKnown RBP eCLIP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 WDR26Q9H7D7 661 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 FGF22Q9HCT0 170 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 RPL26L1Q9UNX3 145 aaKnown RBP13.03□□□□□ -0.32
CNOT1-220ENST00000569916 PCDHA3Q9Y5H8 950 aa13.03□□□□□ -0.32
CNOT1-220ENST00000569916 ASPMQ8IZT6 3477 aa13.02□□□□□ -0.32
CNOT1-220ENST00000569916 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 FAM149AA5PLN7 773 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 LMO7DNF2Z398 122 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 TPP1O14773 563 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-220ENST00000569916 MYF5P13349 255 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 STC1P52823 247 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 SRP54P61011 504 aaKnown RBP13.02□□□□□ -0.33
CNOT1-220ENST00000569916 COPS2P61201 443 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 PTSQ03393 145 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 SLC14A2Q15849 920 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 QPCTQ16769 361 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.33
CNOT1-220ENST00000569916 TMPRSS12Q86WS5 348 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 FSTL5Q8N475 847 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-220ENST00000569916 OR56A4Q8NGH8 313 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 TFB1MQ8WVM0 346 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms