RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RBM15Q96T37 977 aaKnown RBP eCLIP13.83□□□□□ -0.28e-7■□□□□ 10.7
HERPUD1-218ENST00000569569 HERPUD2Q9BSE4 406 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 MLPHQ9BV36 600 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 KLF15Q9UIH9 416 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ANGPTL2Q9UKU9 493 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 PLXNB3Q9ULL4 1909 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 MYLKQ15746 1914 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ASXL3Q9C0F0 2248 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA8CPA6NN73 597 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 H7C0C1 242 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ENC1O14682 589 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 SCAMP1O15126 338 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 DDX3YO15523 660 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 HOXC4P09017 264 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 CCDC175P0C221 793 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ATXN1LP0C7T5 689 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ATP5OP48047 213 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 BLKP51451 505 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 SHC2P98077 582 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 OTUD4Q01804 1114 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 PPARDQ03181 441 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 PTSQ03393 145 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 NFATC4Q14934 902 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 PTPRRQ15256 657 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 LRRC66Q68CR7 880 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 AADACL2Q6P093 401 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ENPP7Q6UWV6 458 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF662Q6ZS27 426 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 Q6ZVL8 140 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 PID1Q7Z2X4 250 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 HSD11B1LQ7Z5J1 315 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 TECPR1Q7Z6L1 1165 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 SLCO6A1Q86UG4 719 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 RAVER1Q8IY67 606 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ACTL9Q8TC94 416 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 ADAMTS14Q8WXS8 1223 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 TADA1Q96BN2 335 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 DTD2Q96FN9 168 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 HES6Q96HZ4 224 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 QKIQ96PU8 341 aaKnown RBP eCLIP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 FERMT1Q9BQL6 677 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 TOR4AQ9NXH8 423 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 OR1A2Q9Y585 309 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
HERPUD1-218ENST00000569569 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 RP1P56715 2156 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CACNB4O00305 520 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 AQP9O43315 295 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 DKK1O94907 266 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 MT-CYBP00156 380 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 GIMD1P0DJR0 217 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 ALPPL2P10696 532 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 TSHRP16473 764 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 RBL1P28749 1068 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CD68P34810 354 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 ETV3P41162 512 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 KIAA1024LP59773 190 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CCZ1BP86790 482 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CDK18Q07002 472 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 DPTQ07507 201 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 QPCTQ16769 361 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 FAXCQ5TGI0 409 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 NLRP8Q86W28 1048 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 PHACTR4Q8IZ21 702 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF567Q8N184 647 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 PNPLA1Q8N8W4 532 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF548Q8NEK5 533 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 OR4C6Q8NH72 309 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 SPATA22Q8NHS9 363 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 FUBP1Q96AE4 644 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 TBATAQ96M53 351 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 WDR92Q96MX6 357 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 SMIM14Q96QK8 99 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 SLC13A1Q9BZW2 595 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 CAAP1Q9H8G2 361 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 NLGN3Q9NZ94 848 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 APOBEC3BQ9UH17 382 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 PNMA8BQ9ULN7 279 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
HERPUD1-218ENST00000569569 A0A0U1RQS6 177 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PDE2AO00408 941 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TRIM38O00635 465 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 SIGLEC6O43699 453 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CLDN7O95471 211 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 C1SP09871 688 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms