RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 ZNF106Q9H2Y7 1883 aaKnown RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 COL4A2P08572 1712 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SCN8AQ9UQD0 1980 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 C1orf232A0A0U1RR37 186 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 C2CD4DB7Z1M9 353 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 GOLGA8RI6L899 631 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 CCL22O00626 93 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 TM9SF1O15321 606 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 SHOX2O60902 331 aaPredicted RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 ZWINTO95229 277 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 PRNPP04156 253 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 LEPRP48357 1165 aaKnown RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 CD151P48509 253 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SERPINB8P50452 374 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 GNGT1P63211 74 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 MPP1Q00013 466 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 PTPRRQ15256 657 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 CDKN3Q16667 212 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 ZNF805Q5CZA5 627 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SERPINA13PQ6UXR4 307 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 TPRG1Q6ZUI0 275 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SDCCAG8Q86SQ7 713 aaPredicted RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 CABS1Q96KC9 395 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 MCCC1Q96RQ3 725 aaPredicted RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 KLF6Q99612 283 aaPredicted RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 GPR22Q99680 433 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 SUDS3Q9H7L9 328 aaPredicted RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 SUN2Q9UH99 717 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 MTO1Q9Y2Z2 717 aaKnown RBP12.62□□□□□ -0.39
GGA2-213ENST00000568922 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
GGA2-213ENST00000568922 REV3LO60673 3130 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 OR51F1A6NGY5 319 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 COPEO14579 308 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 TPP1O14773 563 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 NPC1O15118 1278 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 ALDOAP04075 364 aaKnown RBP12.61□□□□□ -0.39
GGA2-213ENST00000568922 GABRB3P28472 473 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 TYK2P29597 1187 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 MAGEA12P43365 314 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 MPP2Q14168 576 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
GGA2-213ENST00000568922 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
GGA2-213ENST00000568922 SFTPA1Q8IWL2 248 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 ZNF366Q8N895 744 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 ATXN7L3BQ96GX2 97 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
GGA2-213ENST00000568922 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
GGA2-213ENST00000568922 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
GGA2-213ENST00000568922 NPIPB15A6NHN6 443 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 HAUS5O94927 633 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CLDN7O95471 211 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 S1PR4O95977 384 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 MPOP05164 745 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CTSLP07711 333 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 HLA-EP13747 358 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 HNRNPLP14866 589 aaKnown RBP eCLIP12.6□□□□□ -0.39
GGA2-213ENST00000568922 RPA3P35244 121 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 IL12RB1P42701 662 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 SOX9P48436 509 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 GALK1P51570 392 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CLCN5P51795 746 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 PTPN5P54829 565 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 PPARDQ03181 441 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 ELAVL3Q14576 367 aaKnown RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 SEPT7Q16181 437 aaKnown RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 CRTC1Q6UUV9 634 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 STK40Q8N2I9 435 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CBARPQ8N350 705 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 TMIEQ8NEW7 156 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 ATXN2LQ8WWM7 1075 aaKnown RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 EID2BQ96D98 161 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 BPIFA1Q9NP55 256 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 PCMTD2Q9NV79 361 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 INTS10Q9NVR2 710 aaKnown RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 MARCH4Q9P2E8 410 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 CORO1CQ9ULV4 474 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 FAM95CA0A1B0GW59 222 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 PFDN6O15212 129 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 F7P08709 466 aaPredicted RBP12.6□□□□□ -0.39
GGA2-213ENST00000568922 BMP1P13497 986 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 MC4RP32245 332 aa12.6□□□□□ -0.39
GGA2-213ENST00000568922 FOXN2P32314 431 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms