RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C1QTNF7Q9BXJ2 289 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 MIR1-1HGQ9H1L0 117 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 L2HGDHQ9H9P8 463 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 PIH1D1Q9NWS0 290 aaKnown RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 RAPGEFL1Q9UHV5 662 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 PILRBQ9UKJ0 227 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 FANCMQ8IYD8 2048 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 GOLGA8CPA6NN73 597 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 EFCAB8A8MWE9 144 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 PRAMEF26H0Y7S4 382 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 AP3B1O00203 1094 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 WNT9AO14904 365 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 EPN2O95208 641 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 AKT2P31751 481 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 ETV3P41162 512 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
COMMD4-224ENST00000568877 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
COMMD4-224ENST00000568877 IZUMO3Q5VZ72 239 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 Q6ZVL8 140 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 CYP2U1Q7Z449 544 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 GLT6D1Q7Z4J2 308 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 TECPR1Q7Z6L1 1165 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 TTC30BQ8N4P2 665 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 NAT8LQ8N9F0 302 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 MCUQ8NE86 351 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 C1orf216Q8TAB5 229 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 BRSK1Q8TDC3 778 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 PIGKQ92643 395 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 KLF6Q99612 283 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-224ENST00000568877 ERP44Q9BS26 406 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 TRIM31Q9BZY9 425 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 FZD3Q9NPG1 666 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 KCTD5Q9NXV2 234 aa16.74■□□□□ 0.27
COMMD4-224ENST00000568877 RGSL1A5PLK6 1076 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 RAD51BO15315 384 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 TMEM63AO94886 807 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 LMNAP02545 664 aaKnown RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SLC4A1P02730 911 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 HMGCLP35914 325 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 DPP6P42658 865 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SPINT3P49223 89 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 LRRC14Q15048 493 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 TAF1AQ15573 450 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 WSCD2Q2TBF2 565 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 CERCAMQ5T4B2 595 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 PEAR1Q5VY43 1037 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 LRRC8BQ6P9F7 803 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 RFLNAQ6ZTI6 216 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 ZNF534Q76KX8 674 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 HOOK3Q86VS8 718 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 NRSN1Q8IZ57 195 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 TP53I13Q8NBR0 393 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 NOA1Q8NC60 698 aaKnown RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 DENND6BQ8NEG7 585 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 NUS1Q96E22 293 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 DTD2Q96FN9 168 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SNF8Q96H20 258 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SLC6A18Q96N87 628 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 MYOCQ99972 504 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 TMEM74BQ9NUR3 256 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 PKD2L2Q9NZM6 624 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 UTP11Q9Y3A2 253 aaKnown RBP16.73■□□□□ 0.27
COMMD4-224ENST00000568877 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 SLCO1B1Q9Y6L6 691 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 ABCA7Q8IZY2 2146 aa16.73■□□□□ 0.27
COMMD4-224ENST00000568877 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 THADAQ6YHU6 1953 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 C2orf81A6NN90 581 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 PROB1E7EW31 1015 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 BCAT2O15382 392 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 CRTAMO95727 393 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 GNSP15586 552 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 HOXD12P35452 270 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 RPL21P46778 160 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 NPY2RP49146 381 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 RACK1P63244 317 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 NHLH1Q02575 133 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 STAT4Q14765 748 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 POU6F1Q14863 301 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 ZCCHC9Q8N567 271 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 TMEM145Q8NBT3 493 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 RAB17Q9H0T7 212 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 ARRDC1-AS1Q9H2J1 176 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 TM9SF3Q9HD45 589 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 MBNL1Q9NR56 388 aaKnown RBP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 AASDHPPTQ9NRN7 309 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.72■□□□□ 0.27
COMMD4-224ENST00000568877 IL17CQ9P0M4 197 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 SUSD2Q9UGT4 822 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 SNX24Q9Y343 169 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 HS3ST3A1Q9Y663 406 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 ARL5AQ9Y689 179 aa16.72■□□□□ 0.27
COMMD4-224ENST00000568877 A0A1B0GTW7 788 aa16.71■□□□□ 0.27
COMMD4-224ENST00000568877 GOLGA8MH3BSY2 632 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms