RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 IPO13O94829 963 aaKnown RBP18.14■□□□□ 0.5
SMPD3-211ENST00000568373 SLC4A1P02730 911 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 KCNA5P22460 613 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 CSKP41240 450 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 SUOXP51687 545 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 CYP4F8P98187 520 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 TIAL1Q01085 375 aaKnown RBP eCLIP18.14■□□□□ 0.5
SMPD3-211ENST00000568373 TRAF2Q12933 501 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 NCEH1Q6PIU2 408 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 MRPS31Q92665 395 aaKnown RBP18.14■□□□□ 0.5
SMPD3-211ENST00000568373 ALG14Q96F25 216 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 CNDP1Q96KN2 507 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 SHCBP1LQ9BZQ2 653 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 VPS51Q9UID3 782 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 LSM7Q9UK45 103 aaKnown RBP18.14■□□□□ 0.5
SMPD3-211ENST00000568373 SSX2IPQ9Y2D8 614 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 TMC8Q8IU68 726 aa18.14■□□□□ 0.49
SMPD3-211ENST00000568373 DCAF4L2Q8NA75 395 aa18.14■□□□□ 0.49
SMPD3-211ENST00000568373 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
SMPD3-211ENST00000568373 SMIM14Q96QK8 99 aa18.14■□□□□ 0.49
SMPD3-211ENST00000568373 MTF2Q9Y483 593 aaPredicted RBP18.14■□□□□ 0.49
SMPD3-211ENST00000568373 DCXO43602 365 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 LRG1P02750 347 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 CKMP06732 381 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 PRSS56P0CW18 603 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 LPOP22079 712 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 RAP1GDS1P52306 607 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 COPAP53621 1224 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 RHOAP61586 193 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 MXRA7P84157 204 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 SWT1Q5T5J6 900 aaKnown RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 WLSQ5T9L3 541 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 ISCA2Q86U28 154 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 PHTF2Q8N3S3 785 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 KDM1BQ8NB78 822 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 TTC16Q8NEE8 873 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 BHMTQ93088 406 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 ARMC5Q96C12 935 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 CMTM5Q96DZ9 223 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 AARSD1Q9BTE6 412 aaKnown RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 LRRC3Q9BY71 257 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 NUF2Q9BZD4 464 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 ALG9Q9H6U8 611 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 WDR55Q9H6Y2 383 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 CYP4F12Q9HCS2 524 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 DNMT3BQ9UBC3 853 aaKnown RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 ZBTB14O43829 449 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 LINC00271P0C7V0 271 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 CPOXP36551 454 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 SLC7A9P82251 487 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 PREPLQ4J6C6 727 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 SLC22A9Q8IVM8 553 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 MFN1Q8IWA4 741 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 HS6ST3Q8IZP7 471 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 POU5F2Q8N7G0 328 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 TCF12Q99081 682 aa18.13■□□□□ 0.49
SMPD3-211ENST00000568373 FCF1Q9Y324 198 aaKnown RBP18.13■□□□□ 0.49
SMPD3-211ENST00000568373 GOLGA8QA0A0J9YX86 632 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 GOLGA8OA6NCC3 632 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 GOLGA8NF8WBI6 632 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 NEMP1O14524 444 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 ZNF37AP17032 561 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-211ENST00000568373 EPHA3P29320 983 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 CDC25CP30307 473 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 RALGPS1Q5JS13 557 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 LILRA6Q6PI73 481 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 ACAD11Q709F0 780 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 HTR3DQ70Z44 454 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 ENDOVQ8N8Q3 282 aaKnown RBP18.12■□□□□ 0.49
SMPD3-211ENST00000568373 LPGAT1Q92604 370 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 EBF2Q9HAK2 575 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 NOP53Q9NZM5 478 aaKnown RBP18.12■□□□□ 0.49
SMPD3-211ENST00000568373 NKX1-2Q9UD57 310 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-211ENST00000568373 CDYLQ9Y232 598 aa18.12■□□□□ 0.49
SMPD3-211ENST00000568373 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.12■□□□□ 0.49
SMPD3-211ENST00000568373 MEI4A8MW99 385 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 TM7SF2O76062 418 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 CD1DP15813 335 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PRDX6P30041 224 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 ABL2P42684 1182 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PLK1P53350 603 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 KPNB1Q14974 876 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 NAA25Q14CX7 972 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 LSM12Q3MHD2 195 aaKnown RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 SH2D4BQ5SQS7 431 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 CCDC149Q6ZUS6 474 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 FIBCD1Q8N539 461 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 DDI1Q8WTU0 396 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PTERQ96BW5 349 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 PPP1R36Q96LQ0 422 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 C2orf49Q9BVC5 232 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 OSBPL1AQ9BXW6 950 aa18.11■□□□□ 0.49
SMPD3-211ENST00000568373 POLR3BQ9NW08 1133 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-211ENST00000568373 CFAP97Q9P2B7 532 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms