RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RFWD2Q8NHY2 731 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 PPP2R3CQ969Q6 453 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 ISL2Q96A47 359 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 OLFM1Q99784 485 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 NLE1Q9NVX2 485 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 SIRPGQ9P1W8 387 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZNF711Q9Y462 761 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 C2orf16Q68DN1 1984 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CCT8L1PA6NM43 557 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 BIRC5O15392 142 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 GPR39O43194 453 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZNF821O75541 412 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 LYPLA1O75608 230 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 UGT2B4P06133 528 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 GSTA1P08263 222 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MYL2P10916 166 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 RALBP11234 206 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FMO4P31512 558 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MAPK8P45983 427 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CLCN5P51795 746 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CCNHP51946 323 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 PLK1P53350 603 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 RAD51Q06609 339 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 GEN1Q17RS7 908 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 AFTPHQ6ULP2 937 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 DPY19L3Q6ZPD9 716 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CCDC91Q7Z6B0 441 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 PIM3Q86V86 326 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CRLF3Q8IUI8 442 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FSTL5Q8N475 847 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZNF366Q8N895 744 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 BPIFB1Q8TDL5 484 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 PIH1D2Q8WWB5 315 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 SREK1Q8WXA9 508 aaKnown RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 PEX13Q92968 403 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 RSPRY1Q96DX4 576 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MOCOSQ96EN8 888 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 C20orf27Q9GZN8 174 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 XPR1Q9UBH6 696 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZMYM5Q9UJ78 669 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FAM50BQ9Y247 325 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FZD6O60353 706 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CLDN7O95471 211 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 GSRP00390 522 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CCDC166P0CW27 439 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ADH5P11766 374 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ARSAP15289 507 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 GRIA4P48058 902 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 DGKGP49619 791 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ACVR1Q04771 509 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SULT2A1Q06520 285 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SETDB1Q15047 1291 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 RAB30Q15771 203 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 MYLK3Q32MK0 819 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 RALGPS1Q5JS13 557 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ARMC3Q5W041 872 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CES4AQ5XG92 561 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 FAM151BQ6UXP7 276 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CLEC14AQ86T13 490 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ADIPOR2Q86V24 386 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 LMNTD2Q8IXW0 634 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CENPLQ8N0S6 344 aaPredicted RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 AHI1Q8N157 1196 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 AGR3Q8TD06 166 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 OSCP1Q8WVF1 389 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 OTUB2Q96DC9 234 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 TSPAN17Q96FV3 270 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ABHD8Q96I13 439 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 MTG2Q9H4K7 406 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 HACD3Q9P035 362 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 HS3ST2Q9Y278 367 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ANKRD6Q9Y2G4 727 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SLC30A1Q9Y6M5 507 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SPTBN5Q9NRC6 3674 aaKnown RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 SOBPA7XYQ1 873 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 TRAFD1O14545 582 aaPredicted RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 KLF11O14901 512 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 LINC01565O15544 149 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ITM2AO43736 263 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SRP72O76094 671 aaKnown RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 ADH1CP00326 375 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CYP17A1P05093 508 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 FGF3P11487 239 aaPredicted RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 HNF1BP35680 557 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SLC1A6P48664 564 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 STC1P52823 247 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ARFIP2P53365 341 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CDKN2DP55273 166 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ZBTB16Q05516 673 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 DLG1Q12959 904 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 FAM83EQ2M2I3 478 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 POM121L1PQ3SYA9 428 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 CARD16Q5EG05 197 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms