RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TCEAL2Q9H3H9 227 aaPredicted RBP18.37■□□□□ 0.53
SYNGR3-204ENST00000564642 PCDH9Q9HC56 1237 aa18.37■□□□□ 0.53
SYNGR3-204ENST00000564642 SAE1Q9UBE0 346 aaPredicted RBP18.37■□□□□ 0.53
SYNGR3-204ENST00000564642 KLQ9UEF7 1012 aa18.37■□□□□ 0.53
SYNGR3-204ENST00000564642 DOLKQ9UPQ8 538 aa18.37■□□□□ 0.53
SYNGR3-204ENST00000564642 A0A0J9YYE9 177 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TPP1O14773 563 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 RASGRP1O95267 797 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TRBC1P01850 177 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 PROS1P07225 676 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 ANXA6P08133 673 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 KELP23276 732 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 HNF1BP35680 557 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TRIM23P36406 574 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 CD86P42081 329 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 DUSP3P51452 185 aaPredicted RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 HK3P52790 923 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 SRP54P61011 504 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 RPL26P61254 145 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 IHHQ14623 411 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 PTPRRQ15256 657 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 DEFB133Q30KQ1 61 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 ESRP1Q6NXG1 681 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 ZCCHC8Q6NZY4 707 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 HSD11B1LQ7Z5J1 315 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TSPAN33Q86UF1 283 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TMPRSS12Q86WS5 348 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 FAM181AQ8N9Y4 354 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 LPCAT1Q8NF37 534 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 TFB1MQ8WVM0 346 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 KRT35Q92764 455 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 AGAP3Q96P47 875 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 CEP41Q9BYV8 373 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 LACRTQ9GZZ8 138 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 DNPEPQ9ULA0 475 aa18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 PNMA8BQ9ULN7 279 aaPredicted RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 RPL26L1Q9UNX3 145 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-204ENST00000564642 hCG_1818297A0A087WSY0 165 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 GOLGA6CA6NDK9 693 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 GOLGA6BA6NDN3 693 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 PDE2AO00408 941 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 PJA2O43164 708 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 GCATO75600 419 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 PRLP01236 227 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 TNFP01375 233 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 HOXC4P09017 264 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 GOLGA6DP0CG33 693 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 CKMT1AP12532 417 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 TSHRP16473 764 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 ZNF30P17039 623 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 ETV3P41162 512 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 MARCKSL1P49006 195 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 KIAA1024LP59773 190 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 SKOR1P84550 965 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 E2F1Q01094 437 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 ELOCQ15369 112 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 ALG11Q2TAA5 492 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 LRRC66Q68CR7 880 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 CRTC1Q6UUV9 634 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 Q6ZVL8 140 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 NT5DC3Q86UY8 548 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 TMEM139Q8IV31 216 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 CBARPQ8N350 705 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 FSTL5Q8N475 847 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 OR56A4Q8NGH8 313 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 FUBP1Q96AE4 644 aaKnown RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 DTD2Q96FN9 168 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 LRRC61Q9BV99 259 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 ADGRE3Q9BY15 652 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 WDR26Q9H7D7 661 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 USP29Q9HBJ7 922 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 GOLGA6AQ9NYA3 693 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 NCKIPSDQ9NZQ3 722 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 PCDHA3Q9Y5H8 950 aa18.35■□□□□ 0.53
SYNGR3-204ENST00000564642 A0A0U1RQS6 177 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 TMEM8BA6NDV4 472 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 CAPN8A6NHC0 703 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 MMP2P08253 660 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 JUPP14923 745 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 PECAM1P16284 738 aaPredicted RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 COPS2P61201 443 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 PTSQ03393 145 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 KIF5AQ12840 1032 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 PPP2R5EQ16537 467 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 TEX44Q53QW1 395 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 ZC3H18Q86VM9 953 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 SCG3Q8WXD2 468 aaKnown RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 GLMNQ92990 594 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 RBM15Q96T37 977 aaKnown RBP eCLIP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 MLPHQ9BV36 600 aaPredicted RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 PHPT1Q9NRX4 125 aaPredicted RBP18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 MOSPD1Q9UJG1 213 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 CEP295Q9C0D2 2601 aa18.34■□□□□ 0.53
SYNGR3-204ENST00000564642 LRP4O75096 1905 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms