RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NDRG2Q9UN36 371 aaKnown RBP7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CHKBQ9Y259 395 aa7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PIAS3Q9Y6X2 628 aa7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 COL4A3Q01955 1670 aa7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 COL4A2P08572 1712 aa7.47□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 E2F8A0AVK6 867 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ILVBLA1L0T0 632 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KRBA1A5PL33 1030 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TMEM114B3SHH9 223 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC9A3R1O14745 358 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HGSO14964 777 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 UNC5CO95185 931 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 VAPBO95292 243 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NFATC1O95644 943 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TOP3BO95985 862 aaKnown RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MMP2P08253 660 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SERPINF2P08697 491 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 COL6A2P12110 1019 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CPA3P15088 417 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CD72P21854 359 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GRK2P25098 689 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HOXD9P28356 352 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC1A2P43004 574 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CHRNA4P43681 627 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ABCG1P45844 678 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RASSF2P50749 326 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CLCN5P51795 746 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC12A2P55011 1212 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MPP1Q00013 466 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF177Q13360 481 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC12A1Q13621 1099 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RUNX3Q13761 415 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 USP10Q14694 798 aaKnown RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RFTN1Q14699 578 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GRM3Q14832 879 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 UBXN2BQ14CS0 331 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PCLAFQ15004 111 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PDGFRLQ15198 375 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 EML3Q32P44 896 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ITPRIPL2Q3MIP1 535 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ADGRF1Q5T601 910 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MBLAC2Q68D91 279 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 IL31Q6EBC2 164 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF470Q6ECI4 717 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ALG1LQ6GMV1 187 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ESRP1Q6NXG1 681 aaKnown RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C16orf46Q6P387 395 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RAPH1Q70E73 1250 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KDELC2Q7Z4H8 507 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CLEC14AQ86T13 490 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SETD3Q86TU7 594 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DENND1CQ8IV53 801 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 BBS7Q8IWZ6 715 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LMNTD2Q8IXW0 634 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CPA6Q8N4T0 437 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HJURPQ8NCD3 748 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OR7D4Q8NG98 312 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RFWD2Q8NHY2 731 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARRDC2Q8TBH0 407 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RDH11Q8TC12 318 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MYEOVQ96EZ4 313 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TSPAN17Q96FV3 270 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PRICKLE1Q96MT3 831 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RAB3IPQ96QF0 476 aaPredicted RBP7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CAB39LQ9H9S4 337 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TBC1D17Q9HA65 648 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HPS4Q9NQG7 708 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KCNK4Q9NYG8 393 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TBC1D14Q9P2M4 693 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 COPG2Q9UBF2 871 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 WNT16Q9UBV4 365 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FBXO5Q9UKT4 447 aa7.46□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZFYVE26Q68DK2 2539 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 A0A087X1B8 175 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GOLGA8TH3BQL2 631 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC7A4O43246 635 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KDELR3O43731 214 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DNAJC6O75061 913 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NDST3O95803 873 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 EPOP01588 193 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CYP17A1P05093 508 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C2P06681 752 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DLDP09622 509 aaKnown RBP7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ATXN1LP0C7T5 689 aaKnown RBP7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MYL2P10916 166 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RALBP11234 206 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FGF3P11487 239 aaPredicted RBP7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NQO1P15559 274 aaKnown RBP7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 STMN1P16949 149 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CES1P23141 567 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CRABP2P29373 138 aa7.45□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARCN1P48444 511 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms