RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 COQ10AQ96MF6 247 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 DESI2Q9BSY9 194 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 NCKIPSDQ9NZQ3 722 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
CLK3-213ENST00000563842 NEUROG3Q9Y4Z2 214 aa13.41□□□□□ -0.26
CLK3-213ENST00000563842 ZFC3H1O60293 1989 aaKnown RBP13.41□□□□□ -0.26
CLK3-213ENST00000563842 FASNP49327 2511 aaKnown RBP13.41□□□□□ -0.26
CLK3-213ENST00000563842 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 NPIPB15A6NHN6 443 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 TPP1O14773 563 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 AQP9O43315 295 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 TJP3O95049 919 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 RASGRP1O95267 797 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 PTMAP06454 111 aaKnown RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 PYGLP06737 847 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 PECAM1P16284 738 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 CTPS1P17812 591 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 HNF1BP35680 557 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 TRIM23P36406 574 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 TNNT3P45378 269 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 KIAA1024LP59773 190 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 SKOR1P84550 965 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 DAB2P98082 770 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 LLGL1Q15334 1064 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 DENND2CQ68D51 928 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 PNCKQ6P2M8 343 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 ENPP7Q6UWV6 458 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 ZC3H18Q86VM9 953 aaKnown RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 PHACTR4Q8IZ21 702 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 CBARPQ8N350 705 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 GALNT15Q8N3T1 639 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 ZNF548Q8NEK5 533 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 GLMNQ92990 594 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 HAUS1Q96CS2 278 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 DTD2Q96FN9 168 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 TEKT5Q96M29 485 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 LYSMD1Q96S90 227 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 SRPK1Q96SB4 655 aaKnown RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 HEMGNQ9BXL5 484 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 OSBPL8Q9BZF1 889 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 GLOD4Q9HC38 313 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 PHPT1Q9NRX4 125 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 TOR4AQ9NXH8 423 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
CLK3-213ENST00000563842 KLQ9UEF7 1012 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 MYLKQ15746 1914 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 PLXNB3Q9ULL4 1909 aa13.4□□□□□ -0.26
CLK3-213ENST00000563842 ANKRD66B4E2M5 251 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 H7C0C1 242 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 TNFRSF10CO14798 259 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 FFAR2O15552 330 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 SIGLEC6O43699 453 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 HYAL3O43820 417 aaPredicted RBP13.39□□□□□ -0.27
CLK3-213ENST00000563842 RFPL3O75679 317 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 DKK1O94907 266 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 PRLP01236 227 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 TNFP01375 233 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 MMP2P08253 660 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ALPIP09923 528 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 CTSEP14091 401 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 LHCGRP22888 699 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 PTPN3P26045 913 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 TEAD1P28347 426 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ATP5OP48047 213 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 HK3P52790 923 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 DPTQ07507 201 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 NOMO1Q15155 1222 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ELOCQ15369 112 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 PROX2Q3B8N5 592 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 LRRC66Q68CR7 880 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ZCCHC8Q6NZY4 707 aaKnown RBP13.39□□□□□ -0.27
CLK3-213ENST00000563842 CRTC1Q6UUV9 634 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ZNF765Q7L2R6 523 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 NLRP8Q86W28 1048 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 NRSN1Q8IZ57 195 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 PNPLA1Q8N8W4 532 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 FAM181AQ8N9Y4 354 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 TTC13Q8NBP0 860 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 LMX1AQ8TE12 382 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
CLK3-213ENST00000563842 QKIQ96PU8 341 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLK3-213ENST00000563842 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLK3-213ENST00000563842 CEP41Q9BYV8 373 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 WDR26Q9H7D7 661 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 UCKL1Q9NWZ5 548 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms