RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 UCKL1Q9NWZ5 548 aa20.3■□□□□ 0.84
CMTM3-206ENST00000563672 DNPEPQ9ULA0 475 aa20.3■□□□□ 0.84
CMTM3-206ENST00000563672 PNMA8BQ9ULN7 279 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-206ENST00000563672 LRRK1Q38SD2 2015 aa20.3■□□□□ 0.84
CMTM3-206ENST00000563672 GOLGA8CPA6NN73 597 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 MT-CYBP00156 380 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 HOXC4P09017 264 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 RBP3P10745 1247 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 ZNF30P17039 623 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 PMLP29590 882 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 EIF3EP60228 445 aaKnown RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 KLF1Q13351 362 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 CDKN3Q16667 212 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 LRRC66Q68CR7 880 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 DENND2CQ68D51 928 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 ESRP1Q6NXG1 681 aaKnown RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 PNCKQ6P2M8 343 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 Q6ZVL8 140 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 PID1Q7Z2X4 250 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 PELI3Q8N2H9 469 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 NUS1Q96E22 293 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 FCRL5Q96RD9 977 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 MLPHQ9BV36 600 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 ADGRE3Q9BY15 652 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 KLHL8Q9P2G9 620 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-206ENST00000563672 TRHDEQ9UKU6 1024 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 OR1A2Q9Y585 309 aa20.29■□□□□ 0.84
CMTM3-206ENST00000563672 TNFSF14O43557 240 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 GIMD1P0DJR0 217 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 NFKB1P19838 968 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 STC1P52823 247 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 CDK18Q07002 472 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 NFATC4Q14934 902 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 MEI1Q5TIA1 1274 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 CDKL3Q8IVW4 592 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-206ENST00000563672 RAVER1Q8IY67 606 aaKnown RBP20.28■□□□□ 0.84
CMTM3-206ENST00000563672 FUBP1Q96AE4 644 aaKnown RBP20.28■□□□□ 0.84
CMTM3-206ENST00000563672 FAM118BQ9BPY3 351 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 TOR4AQ9NXH8 423 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 PPP2R2CQ9Y2T4 447 aa20.28■□□□□ 0.84
CMTM3-206ENST00000563672 K7ESM1 405 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 C1SP09871 688 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 ATXN1LP0C7T5 689 aaKnown RBP20.27■□□□□ 0.84
CMTM3-206ENST00000563672 FTH1P19P0C7X4 201 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 JUNDP17535 347 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 KIAA1024LP59773 190 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 DPTQ07507 201 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 GALNT3Q14435 633 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 KDELC1Q6UW63 502 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 RFLNAQ6ZTI6 216 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 KDELC2Q7Z4H8 507 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 SLCO6A1Q86UG4 719 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 NLRP8Q86W28 1048 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 TTC13Q8NBP0 860 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 BTN2A2Q8WVV5 523 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 TBATAQ96M53 351 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 USP29Q9HBJ7 922 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 UBP1Q9NZI7 540 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 FTSJ1Q9UET6 329 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 FAM153AQ9UHL3 310 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 WASF3Q9UPY6 502 aa20.27■□□□□ 0.84
CMTM3-206ENST00000563672 ARID1BQ8NFD5 2236 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-206ENST00000563672 TCRBV7S2A1N4TA0A589 114 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 GOLGA6L9A6NEM1 432 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 H3BM21 787 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 TRIM38O00635 465 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 SCAMP1O15126 338 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 PMPCBO75439 489 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 DKK1O94907 266 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 CLDN7O95471 211 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 LDOC1O95751 146 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-206ENST00000563672 NDST3O95803 873 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 EPOP01588 193 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 HTR1BP28222 390 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 TEAD1P28347 426 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 PPARDQ03181 441 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 PCSK7Q16549 785 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 DARS2Q6PI48 645 aaKnown RBP20.26■□□□□ 0.83
CMTM3-206ENST00000563672 PHACTR4Q8IZ21 702 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 ZNF548Q8NEK5 533 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-206ENST00000563672 OR4C6Q8NH72 309 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 OXNAD1Q96HP4 312 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-206ENST00000563672 FERMT1Q9BQL6 677 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 ABCG8Q9H221 673 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 TCEAL2Q9H3H9 227 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-206ENST00000563672 CSNK1G3Q9Y6M4 447 aa20.26■□□□□ 0.83
CMTM3-206ENST00000563672 LOC285095A0A1B0GVY8 99 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 NEMP2A6NFY4 417 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 CACNB4O00305 520 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-206ENST00000563672 TRIM16O95361 564 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 TSHRP16473 764 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 WNT3AP56704 352 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 RPS6KA1Q15418 735 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 ALG11Q2TAA5 492 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 ENPP7Q6UWV6 458 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 NYAP1Q6ZVC0 841 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 ZNF765Q7L2R6 523 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 NRSN1Q8IZ57 195 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 RBFAQ8N0V3 343 aa20.25■□□□□ 0.83
CMTM3-206ENST00000563672 ATL2Q8NHH9 583 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms