RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CCNB1P14635 433 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 MIPP30301 263 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 TRIM23P36406 574 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 ETV5P41161 510 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 GNPDA1P46926 289 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 PPM1FP49593 454 aaPredicted RBP13□□□□□ -0.33
SF3B3-202ENST00000562722 OR1D5P58170 312 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 PIM3Q86V86 326 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 HEATR4Q86WZ0 1026 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 PELI3Q8N2H9 469 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 EXD3Q8N9H8 876 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 ZDHHC1Q8WTX9 485 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 PSKH2Q96QS6 385 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 ZWILCHQ9H900 591 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 SPATS2LQ9NUQ6 558 aaKnown RBP13□□□□□ -0.33
SF3B3-202ENST00000562722 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 LRRK1Q38SD2 2015 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 ANKRD36A6QL64 1941 aa13□□□□□ -0.33
SF3B3-202ENST00000562722 A0A1W2PQ67 120 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 TRAFD1O14545 582 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-202ENST00000562722 WISP1O95388 367 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ITGB2P05107 769 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-202ENST00000562722 GM2AP17900 193 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 VIPR1P32241 457 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ETV3P41162 512 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 C16orf72Q14CZ0 275 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 CNGA3Q16281 694 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ASIC2Q16515 512 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 LINC00303Q3SY05 128 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 RAET1GQ6H3X3 334 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 DOK6Q6PKX4 331 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 SLC30A9Q6PML9 568 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 TMPRSS9Q7Z410 1059 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 BBS5Q8N3I7 341 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ARFGAP1Q8N6T3 406 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 JPH3Q8WXH2 748 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 COQ10AQ96MF6 247 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 TRIM4Q9C037 500 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 TAAR2Q9P1P5 351 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 CNOT8Q9UFF9 292 aaKnown RBP12.99□□□□□ -0.33
SF3B3-202ENST00000562722 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
SF3B3-202ENST00000562722 ASH1LQ9NR48 2969 aaKnown RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 C9orf172C9J069 976 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 H3BRJ5 948 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 SOCS5O75159 536 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 HEXIM1O94992 359 aaKnown RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 ECEL1O95672 775 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 FAM87AP0C7U9 286 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 AK4P27144 223 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 CD82P27701 267 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 ARL4AP40617 200 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 ZNF135P52742 658 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 B4GALNT1Q00973 533 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 XKR5Q6UX68 686 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 IRF2BP2Q7Z5L9 587 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 PSTKQ8IV42 348 aaKnown RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 TP53INP2Q8IXH6 220 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 LZTR1Q8N653 840 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 TEX101Q9BY14 249 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 TRIM7Q9C029 511 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 KCTD5Q9NXV2 234 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
SF3B3-202ENST00000562722 MYO1AQ9UBC5 1043 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 SUFUQ9UMX1 484 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
SF3B3-202ENST00000562722 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 STMND1H3BQB6 276 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 B4GAT1O43505 415 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 LRCH4O75427 683 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-202ENST00000562722 FGF1P05230 155 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CEACAM5P06731 702 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CCL4P13236 92 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 HSPA9P38646 679 aaKnown RBP12.97□□□□□ -0.33
SF3B3-202ENST00000562722 POLD2P49005 469 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 HCAR3P49019 387 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 ATP1A2P50993 1020 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CYP4F2P78329 520 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CDK3Q00526 305 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 NFKB2Q00653 900 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 PEX6Q13608 980 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 DPYSQ14117 519 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 SMTNL2Q2TAL5 461 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms