RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CSNK1G1Q9HCP0 422 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PIH1D1Q9NWS0 290 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 CHKBQ9Y259 395 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 CDK5RAP2Q96SN8 1893 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 LTBP1Q14766 1721 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 ANKRD33BA6NCL7 494 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ALDH1A2O94788 518 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 MLYCDO95822 493 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 SHBGP04278 402 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ENO1P06733 434 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 FMO4P31512 558 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 GATMP50440 423 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ANXA11P50995 505 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 CYP4F8P98187 520 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 DSC2Q02487 901 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 RARS2Q5T160 578 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 TMTC4Q5T4D3 741 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ANKRD13BQ86YJ7 626 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 BADQ92934 168 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 NCLNQ969V3 563 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ELOVL6Q9H5J4 265 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 EFCAB1Q9HAE3 211 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 WDR6Q9NNW5 1121 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 IL1RAPL1Q9NZN1 696 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 LZTS1Q9Y250 596 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 SPACA6W5XKT8 324 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ADAMTSL1Q8N6G6 1762 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 EME2A4GXA9 379 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 BTN3A1O00481 513 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 INPPL1O15357 1258 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 IL1BP01584 269 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 DNTTP04053 509 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ELFN1P0C7U0 828 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PKMP14618 531 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 DNAJB1P25685 340 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 MC4RP32245 332 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 GPR1P46091 355 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ARL4DP49703 201 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 CCNG1P51959 295 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 TAF1AQ15573 450 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 CRY1Q16526 586 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 RTP2Q5QGT7 225 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 AHI1Q8N157 1196 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 GALNT15Q8N3T1 639 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PQLC3Q8N755 202 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CASD1Q96PB1 797 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 SLC2A11Q9BYW1 496 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 HEY2Q9UBP5 337 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PCP4L1A6NKN8 68 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 TRAFD1O14545 582 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 HCRTO43612 131 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 FAM189A1O60320 539 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 WDR5P61964 334 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 NRG1Q02297 640 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 HABP4Q5JVS0 413 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 CERCAMQ5T4B2 595 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 TXNRD3NBQ6F5E7 133 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 SLC8B1Q6J4K2 584 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ZDHHC24Q6UX98 284 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 EXOC3L1Q86VI1 746 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 TCAIMQ8N3R3 496 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 BEND7Q8N7W2 519 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 SPOCK2Q92563 424 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CCDC138Q96M89 665 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ACE2Q9BYF1 805 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 TCF7L2Q9NQB0 619 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 SNX15Q9NRS6 342 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 INTS10Q9NVR2 710 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 VPS51Q9UID3 782 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 AP3M1Q9Y2T2 418 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ARFGEF1Q9Y6D6 1849 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 MAGEA13PA6NCF6 341 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ZNF840PA6NDX5 716 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 IL10P22301 178 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CALB2P22676 271 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CRHR1P34998 444 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 THOP1P52888 689 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 AQP5P55064 265 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 CRADDP78560 199 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 GPR33Q49SQ1 333 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PAGE2BQ5JRK9 111 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 ZNF697Q5TEC3 545 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 CCDC124Q96CT7 223 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 FBXO6Q9NRD1 293 aaPredicted RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 OPTCQ9UBM4 332 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 MEIS3P2A8K0S8 358 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 EVPLLA8MZ36 301 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PHGDHO43175 533 aaKnown RBP7.56□□□□□ -1.2
TCF4-216ENST00000562680 KDELR3O43731 214 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PRAMEF11O60813 436 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 PRLP01236 227 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 HTR1BP28222 390 aa7.56□□□□□ -1.2
TCF4-216ENST00000562680 BOP1Q14137 746 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms