RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SOCS5O75159 536 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 JMJD7P0C870 316 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 KRT10P13645 584 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LHCGRP22888 699 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ETV5P41161 510 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PRKCIP41743 596 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 RENBPP51606 427 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZNF135P52742 658 aaPredicted RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TYRO3Q06418 890 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZNF235Q14590 738 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SMTNL2Q2TAL5 461 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NRROSQ86YC3 692 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CBARPQ8N350 705 aaPredicted RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LZTR1Q8N653 840 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 GPBAR1Q8TDU6 330 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PTCD2Q8WV60 388 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 MED8Q96G25 268 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 GBP4Q96PP9 640 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TEX101Q9BY14 249 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CARS2Q9HA77 564 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NOD2Q9HC29 1040 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SPATS2LQ9NUQ6 558 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 WDR70Q9NW82 654 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 AIPL1Q9NZN9 384 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ST14Q9Y5Y6 855 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PRAMEF33A0A0G2JMD5 474 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NPIPB15A6NHN6 443 aaPredicted RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 B8ZZF3 427 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 H3BRJ5 948 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MAFKO60675 156 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PRAMEF10O60809 474 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CPP00450 1065 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CEACAM5P06731 702 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 LIPCP11150 499 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CCNB1P14635 433 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 AMPD1P23109 780 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 VIPR1P32241 457 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PCK1P35558 622 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ETV3P41162 512 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MAZP56270 477 aaKnown RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 B4GALNT1Q00973 533 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TRAF2Q12933 501 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ARHGEF7Q14155 803 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PTPRRQ15256 657 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ANO6Q4KMQ2 910 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 DENND2CQ68D51 928 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 HSD11B1LQ7Z5J1 315 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 C17orf82Q86X59 251 aaPredicted RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 DTD2Q96FN9 168 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MGME1Q9BQP7 344 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FRMD8Q9BZ67 464 aaPredicted RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SUDS3Q9H7L9 328 aaPredicted RBP16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MYO1AQ9UBC5 1043 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 A0A1W2PQ67 120 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 B4GAT1O43505 415 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FGF1P05230 155 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SKILP12757 684 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MAXP61244 160 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CDK3Q00526 305 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TXNRD3NBQ6F5E7 133 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TMCO3Q6UWJ1 677 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ZNF438Q7Z4V0 828 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 KIAA1524Q8TCG1 905 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 HSPH1Q92598 858 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TMEM159Q96B96 161 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CSPG4P5Q96PW8 444 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RDH14Q9HBH5 336 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PHPT1Q9NRX4 125 aaPredicted RBP16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FOXJ2Q9P0K8 574 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SUFUQ9UMX1 484 aa16.69■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 C9orf172C9J069 976 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RARAP10276 462 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 AK4P27144 223 aaPredicted RBP16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 HSPA9P38646 679 aaKnown RBP16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ARL4AP40617 200 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GNPDA1P46926 289 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 OR1D5P58170 312 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 KLHL30Q0D2K2 578 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 C16orf72Q14CZ0 275 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 LINC00303Q3SY05 128 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MAP9Q49MG5 647 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PHF19Q5T6S3 580 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 Q6ZVL8 140 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TSPAN33Q86UF1 283 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ZFAND4Q86XD8 727 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 EXD3Q8N9H8 876 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ZDHHC1Q8WTX9 485 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms