RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 LSMEM2Q8N112 164 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 KYQ8NBH2 561 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 SNRNP27Q8WVK2 155 aaKnown RBP25.34■■□□□ 1.65
NME3-202ENST00000561637 RAPGEF5Q92565 580 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 COQ10AQ96MF6 247 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 DEPDC7Q96QD5 511 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 POLR1BQ9H9Y6 1135 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 ABHD10Q9NUJ1 306 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 SIRPGQ9P1W8 387 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 RCOR3Q9P2K3 495 aaPredicted RBP25.34■■□□□ 1.65
NME3-202ENST00000561637 UVRAGQ9P2Y5 699 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 KLQ9UEF7 1012 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 SALL4Q9UJQ4 1053 aa25.34■■□□□ 1.65
NME3-202ENST00000561637 NPIPB15A6NHN6 443 aaPredicted RBP25.33■■□□□ 1.65
NME3-202ENST00000561637 TOR1BO14657 336 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 TPP1O14773 563 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 CBFA2T2O43439 604 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 MFAP3LO75121 409 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 HSPA9P38646 679 aaKnown RBP25.33■■□□□ 1.65
NME3-202ENST00000561637 GARSP41250 739 aaKnown RBP25.33■■□□□ 1.65
NME3-202ENST00000561637 SLC10A2Q12908 348 aaPredicted RBP25.33■■□□□ 1.65
NME3-202ENST00000561637 MESDQ14696 234 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 PAFAH1B3Q15102 231 aaKnown RBP25.33■■□□□ 1.65
NME3-202ENST00000561637 NR0B2Q15466 257 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 C6orf132Q5T0Z8 1188 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 MARC1Q5VT66 337 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 HSD11B1LQ7Z5J1 315 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 TEX26Q8N6G2 289 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 KCTD6Q8NC69 237 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 WDR92Q96MX6 357 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 DEF6Q9H4E7 631 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 SSUH2Q9Y2M2 353 aa25.33■■□□□ 1.65
NME3-202ENST00000561637 A0A1W2PNU3 283 aaPredicted RBP25.32■■□□□ 1.64
NME3-202ENST00000561637 CFAP69A5D8W1 941 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 AKR1B10O60218 316 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 SOCS5O75159 536 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 RASGRP1O95267 797 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 GP1BAP07359 652 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 PDHA1P08559 390 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 ALPIP09923 528 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 TMEM253P0C7T8 217 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 VIPR1P32241 457 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 DUSP3P51452 185 aaPredicted RBP25.32■■□□□ 1.64
NME3-202ENST00000561637 DSC2Q02487 901 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 KIAA1614Q5VZ46 1190 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 PTCD2Q8WV60 388 aaKnown RBP25.32■■□□□ 1.64
NME3-202ENST00000561637 FAF2Q96CS3 445 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 TBATAQ96M53 351 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 SEMA3CQ99985 751 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 USP29Q9HBJ7 922 aa25.32■■□□□ 1.64
NME3-202ENST00000561637 SPTA1P02549 2419 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 SSU72P8A0A1W2PR75 194 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 PMS2P1A4D2B8 440 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 EME2A4GXA9 379 aaPredicted RBP25.31■■□□□ 1.64
NME3-202ENST00000561637 SLC28A2O43868 658 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 HEXIM1O94992 359 aaKnown RBP25.31■■□□□ 1.64
NME3-202ENST00000561637 PGLSO95336 258 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 ETV3P41162 512 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 POLR2LP62875 67 aaKnown RBP25.31■■□□□ 1.64
NME3-202ENST00000561637 TRIM14Q14142 442 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 SPOCK2Q92563 424 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 MAML1Q92585 1016 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 MED8Q96G25 268 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 ZNF670Q9BS34 389 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 DPH1Q9BZG8 443 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 GULP1Q9UBP9 304 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 RABGEF1Q9UJ41 708 aa25.31■■□□□ 1.64
NME3-202ENST00000561637 WISP1O95388 367 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 CTSEP14091 401 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 HTR1BP28222 390 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 KIAA1024LP59773 190 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 ITKQ08881 620 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 SLC35G2Q8TBE7 412 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 NSMCE1Q8WV22 266 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 PIH1D2Q8WWB5 315 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 NUS1Q96E22 293 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 ABCG4Q9H172 646 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 SUDS3Q9H7L9 328 aaPredicted RBP25.3■■□□□ 1.64
NME3-202ENST00000561637 NHEJ1Q9H9Q4 299 aaPredicted RBP25.3■■□□□ 1.64
NME3-202ENST00000561637 SATB2Q9UPW6 733 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 HYOU1Q9Y4L1 999 aa25.3■■□□□ 1.64
NME3-202ENST00000561637 HLA-DQB2P05538 268 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 NIPAL4Q0D2K0 466 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 PDK2Q15119 407 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 C3orf38Q5JPI3 329 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 ESRP1Q6NXG1 681 aaKnown RBP25.29■■□□□ 1.64
NME3-202ENST00000561637 PNCKQ6P2M8 343 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 Q6ZVL8 140 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 CBARPQ8N350 705 aaPredicted RBP25.29■■□□□ 1.64
NME3-202ENST00000561637 BBS5Q8N3I7 341 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 FSTL5Q8N475 847 aaPredicted RBP25.29■■□□□ 1.64
NME3-202ENST00000561637 CCL4L1Q8NHW4 92 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 MCCC1Q96RQ3 725 aaPredicted RBP25.29■■□□□ 1.64
NME3-202ENST00000561637 THSD1Q9NS62 852 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 PADI4Q9UM07 663 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 PHTF1Q9UMS5 762 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 GPR34Q9UPC5 381 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 TTLL3Q9Y4R7 772 aa25.29■■□□□ 1.64
NME3-202ENST00000561637 COL12A1Q99715 3063 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 BOD1L1Q8NFC6 3051 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms