RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 PIEZO2Q9H5I5 2752 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGEF17Q96PE2 2063 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 A0A1W2PQ67 120 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 SYCE3A1L190 88 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 STMND1H3BQB6 276 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 FGF1P05230 155 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 CCL4P13236 92 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 GPR3P46089 330 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 SCNN1BP51168 640 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 RENBPP51606 427 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 IL10RBQ08334 325 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 NRROSQ86YC3 692 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGAP12Q8IWW6 846 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 PELI3Q8N2H9 469 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 CBARPQ8N350 705 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 ZDHHC1Q8WTX9 485 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 HTR3CQ8WXA8 447 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 COQ10AQ96MF6 247 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 TAAR9Q96RI9 348 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 CARS2Q9HA77 564 aaKnown RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 PHPT1Q9NRX4 125 aaPredicted RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 B4GALT6Q9UBX8 382 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 SEPT3Q9UH03 358 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 MOSPD1Q9UJG1 213 aa11.84□□□□□ -0.51
CARMIL3-204ENST00000561354 IGHV5-10-1A0A0J9YXX1 117 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 RHPN2P1A8MT19 583 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 A8MX80 341 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 AGRPO00253 132 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 TEX33O43247 280 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 DAPK3O43293 454 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ECEL1O95672 775 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 FUCA1P04066 466 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CEACAM5P06731 702 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ERCC2P18074 760 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 TEAD1P28347 426 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CD1CP29017 333 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ALDH4A1P30038 563 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 HCAR3P49019 387 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 OR1D5P58170 312 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CYP4F2P78329 520 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NFKB2Q00653 900 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 PEX6Q13608 980 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CA9Q16790 459 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 AMZ1Q400G9 498 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ERMARDQ5T6L9 678 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 RFX8Q6ZV50 586 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 PSTKQ8IV42 348 aaKnown RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NPWQ8N729 165 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NKD1Q969G9 470 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NUS1Q96E22 293 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NSMCE3Q96MG7 304 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ZNF599Q96NL3 588 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 NUDT22Q9BRQ3 303 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 SLC12A9Q9BXP2 914 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 FRMD8Q9BZ67 464 aaPredicted RBP11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 CDH19Q9H159 772 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 SLC25A18Q9H1K4 315 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
CARMIL3-204ENST00000561354 LRRC10BA6NIK2 292 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 PSMD11O00231 422 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 DFFAO00273 331 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 SOCS5O75159 536 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 HEXIM1O94992 359 aaKnown RBP11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 FGF3P11487 239 aaPredicted RBP11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 FERP16591 822 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 CR2P20023 1033 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 PSMA2P25787 234 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 NFKBIAP25963 317 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 VIPR1P32241 457 aa11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 HSPA9P38646 679 aaKnown RBP11.82□□□□□ -0.52
CARMIL3-204ENST00000561354 ARSDP51689 593 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms