RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 KTI12Q96EK9 354 aaPredicted RBP2.53□□□□□ -2
SPG11-222ENST00000560435 MOCOSQ96EN8 888 aa2.53□□□□□ -2
SPG11-222ENST00000560435 TRAPPC9Q96Q05 1148 aa2.53□□□□□ -2
SPG11-222ENST00000560435 TRIM51Q9BSJ1 452 aa2.53□□□□□ -2
SPG11-222ENST00000560435 MCRIP2Q9BUT9 160 aaKnown RBP2.53□□□□□ -2
SPG11-222ENST00000560435 TTC12Q9H892 705 aaPredicted RBP2.53□□□□□ -2
SPG11-222ENST00000560435 BARHL2Q9NY43 387 aa2.53□□□□□ -2
SPG11-222ENST00000560435 RASAL2Q9UJF2 1139 aa2.53□□□□□ -2
SPG11-222ENST00000560435 OR2W1Q9Y3N9 320 aa2.53□□□□□ -2
SPG11-222ENST00000560435 CTAGE9A4FU28 777 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 LGALS16A8MUM7 142 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 SH2B2O14492 632 aaPredicted RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 EGFP01133 1207 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 CTAGE8P0CG41 777 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 PCNAP12004 261 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 TNNT1P13805 278 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 PTPN2P17706 415 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 HOXA13P31271 388 aaPredicted RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 HNF1BP35680 557 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 MCM2P49736 904 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 NR1H2P55055 460 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 SMAD1Q15797 465 aaKnown RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 SLC18A3Q16572 532 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 KRT24Q2M2I5 525 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 MMEL1Q495T6 779 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 GPATCH4Q5T3I0 446 aaKnown RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 ZNF790Q6PG37 636 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 RRAGAQ7L523 313 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 SYT13Q7L8C5 426 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 TMTC1Q8IUR5 882 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 CTAGE4Q8IX94 777 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 KLHL29Q96CT2 875 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 TLR8Q9NR97 1041 aaKnown RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 SMYD2Q9NRG4 433 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 MAP3K20Q9NYL2 800 aaKnown RBP2.52□□□□□ -2.01
SPG11-222ENST00000560435 CACNG5Q9UF02 275 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 CD207Q9UJ71 328 aa2.52□□□□□ -2.01
SPG11-222ENST00000560435 FFAR2O15552 330 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 KLK8O60259 260 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CIDEAO60543 219 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CAVIN2O95810 425 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CD48P09326 243 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 GATA2P23769 480 aaPredicted RBP2.51□□□□□ -2.01
SPG11-222ENST00000560435 RRM1P23921 792 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CORO1AP31146 461 aaKnown RBP2.51□□□□□ -2.01
SPG11-222ENST00000560435 BLKP51451 505 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 RAD23BP54727 409 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 HNRNPH2P55795 449 aaKnown RBP2.51□□□□□ -2.01
SPG11-222ENST00000560435 RIGQ13278 110 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 ZNF234Q14588 700 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 TCTEX1D4Q5JR98 221 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 LIN54Q6MZP7 749 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 SLC36A4Q6YBV0 504 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 MTSS1LQ765P7 747 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 TAOK1Q7L7X3 1001 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 TBC1D26Q86UD7 250 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 BMPERQ8N8U9 685 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CEP70Q8NHQ1 597 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 CSGALNACT1Q8TDX6 532 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 FCAMRQ8WWV6 532 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 RNFT2Q96EX2 444 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 MASTLQ96GX5 879 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 ZC3HAV1LQ96H79 300 aaKnown RBP2.51□□□□□ -2.01
SPG11-222ENST00000560435 G6PC2Q9NQR9 355 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 DAAM1Q9Y4D1 1078 aa2.51□□□□□ -2.01
SPG11-222ENST00000560435 E7EVH7 732 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 E9PQ18 207 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 H0Y3Z8 333 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 SYNGR3O43761 229 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 MMP2P08253 660 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 RBM5P52756 815 aaKnown RBP eCLIP2.5□□□□□ -2.01
SPG11-222ENST00000560435 AK2P54819 239 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ISL1P61371 349 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 RPL24P83731 157 aaKnown RBP2.5□□□□□ -2.01
SPG11-222ENST00000560435 PDE1BQ01064 536 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ITGADQ13349 1161 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 EDRF1Q3B7T1 1238 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ZNF774Q6NX45 483 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ANKRD54Q6NXT1 300 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 RBMS3Q6XE24 437 aaKnown RBP2.5□□□□□ -2.01
SPG11-222ENST00000560435 RSRC2Q7L4I2 434 aaKnown RBP2.5□□□□□ -2.01
SPG11-222ENST00000560435 ERC1Q8IUD2 1116 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 FBXL16Q8N461 479 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 DDHD1Q8NEL9 900 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ESRP2Q9H6T0 727 aaKnown RBP2.5□□□□□ -2.01
SPG11-222ENST00000560435 KLHL42Q9P2K6 505 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 RCOR1Q9UKL0 485 aa2.5□□□□□ -2.01
SPG11-222ENST00000560435 ARHGAP10A1A4S6 786 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 CHRM4P08173 479 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 EIF2S3P41091 472 aaKnown RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 YWHAZP63104 245 aaKnown RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 TUBB2AQ13885 445 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 HLTFQ14527 1009 aaKnown RBP eCLIP2.49□□□□□ -2.01
SPG11-222ENST00000560435 PFKFB4Q16877 469 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 ZC2HC1CQ53FD0 456 aaPredicted RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 TECRLQ5HYJ1 363 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 FAM171BQ6P995 826 aa2.49□□□□□ -2.01
SPG11-222ENST00000560435 KCTD18Q6PI47 426 aaPredicted RBP2.49□□□□□ -2.01
SPG11-222ENST00000560435 CDC20BQ86Y33 519 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms