RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 MGAQ8IWI9 3026 aa13.65□□□□□ -0.22
SMAD3-214ENST00000560402 CDRT15L2A8MXV6 281 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 EEF2KO00418 725 aaKnown RBP13.64□□□□□ -0.23
SMAD3-214ENST00000560402 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-214ENST00000560402 CES2O00748 559 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 INSIG1O15503 277 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 KLK10O43240 276 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 C1QL1O75973 258 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 KELP23276 732 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 PSMA2P25787 234 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 KIAA1024LP59773 190 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 ALG11Q2TAA5 492 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 HID1Q8IV36 788 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 PCDH19Q8TAB3 1148 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 WDR92Q96MX6 357 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 SYT11Q9BT88 431 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 APOOQ9BUR5 198 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 CINPQ9BW66 212 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-214ENST00000560402 SP110Q9HB58 689 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD3-214ENST00000560402 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 COQ6Q9Y2Z9 468 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 V9GYY5 206 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-214ENST00000560402 ATMQ13315 3056 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 COL6A6A6NMZ7 2263 aa13.64□□□□□ -0.23
SMAD3-214ENST00000560402 SCN8AQ9UQD0 1980 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ERLIN1O75477 346 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 MYBL1P10243 752 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 LIG3P49916 1009 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 RENBPP51606 427 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 PDX1P52945 283 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 SRP54P61011 504 aaKnown RBP13.63□□□□□ -0.23
SMAD3-214ENST00000560402 OGDHQ02218 1023 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 VAC14Q08AM6 782 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ERMARDQ5T6L9 678 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 PLEKHA7Q6IQ23 1121 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 CRTC1Q6UUV9 634 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ENPP7Q6UWV6 458 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 KYQ8NBH2 561 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ECHDC3Q96DC8 303 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 PBKQ96KB5 322 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 OSBPL9Q96SU4 736 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 RBM15Q96T37 977 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-214ENST00000560402 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
SMAD3-214ENST00000560402 PACSIN1Q9BY11 444 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 ISCUQ9H1K1 167 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 DHX35Q9H5Z1 703 aaKnown RBP13.63□□□□□ -0.23
SMAD3-214ENST00000560402 SYNDIG1Q9H7V2 258 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 DGKBQ9Y6T7 804 aa13.63□□□□□ -0.23
SMAD3-214ENST00000560402 A0A1W2PNU3 283 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TMCO5BA8MYB1 307 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 D6RAR5 112 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 J3KR12 359 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CACNB4O00305 520 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 DAPK3O43293 454 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 RNF8O76064 485 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TNFP01375 233 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 PRB1P04280 392 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 PCCBP05166 539 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CELA2BP08218 269 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 HOXC4P09017 264 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 ELFN1P0C7U0 828 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 ITIH2P19823 946 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 HSPA9P38646 679 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 HADHBP55084 474 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 AP1S1P61966 158 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 POLR2LP62875 67 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CFHR1Q03591 330 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 BCL2L1Q07817 233 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 IL10RBQ08334 325 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 NSUN2Q08J23 767 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 MAMLD1Q13495 774 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 INPP5AQ14642 412 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TCEAL1Q15170 157 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 MEI1Q5TIA1 1274 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 AFMIDQ63HM1 303 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 RFX8Q6ZV50 586 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 DPPA4Q7L190 304 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 DAAM2Q86T65 1068 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 SRLQ86TD4 932 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 ZSWIM9Q86XI8 627 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 LZTR1Q8N653 840 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 NETO2Q8NC67 525 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 SPOCK2Q92563 424 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TSACCQ96A04 125 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CCDC74AQ96AQ1 378 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 PRR11Q96HE9 360 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CELF6Q96J87 481 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CAPZA3Q96KX2 299 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms