RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CHRM4P08173 479 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 TFPIP10646 304 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 LAMP2P13473 410 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 IL11P20809 199 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ARL3P36405 182 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 PGM1P36871 562 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 GALNT2Q10471 571 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 CALCRLQ16602 461 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 CCDC92Q53HC0 331 aaPredicted RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 SH2D4BQ5SQS7 431 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 INO80CQ6PI98 192 aaPredicted RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 IL20RBQ6UXL0 311 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 CPLX4Q7Z7G2 160 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 PRPF39Q86UA1 669 aaKnown RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 MON1AQ86VX9 555 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 SFTPA2Q8IWL1 248 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 MB21D2Q8IYB1 491 aaPredicted RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 DIS3L2Q8IYB7 885 aaKnown RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 CCDC105Q8IYK2 499 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 CHCHD4Q8N4Q1 142 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ZNF114Q8NC26 417 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 RFWD2Q8NHY2 731 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 VMP1Q96GC9 406 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 FEM1CQ96JP0 617 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 IL17FQ96PD4 163 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ZNF385AQ96PM9 386 aaKnown RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 FUZQ9BT04 418 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 GAREM1Q9H706 876 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 DIAPH3Q9NSV4 1193 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 OR6C3Q9NZP0 311 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 HDAC6Q9UBN7 1215 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 MALT1Q9UDY8 824 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
SPG11-218ENST00000559754 TMEM5Q9Y2B1 443 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 A0A087WYN8 130 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 A0A0B4J293 547 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 hCG_1807616A0A1W2PRN6 198 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TSPY2A6NKD2 308 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 EBAG9O00559 213 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 DHX16O60231 1041 aaKnown RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 GUCY1B2O75343 617 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 MLYCDO95822 493 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 CLEC3BP05452 202 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TSPY3P0CV98 308 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TSPY8P0CW00 308 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 IGHV4-30-4P0DP06 118 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 NR2F1P10589 423 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 MAPK4P31152 587 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TTKP33981 857 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 PAFAH1B1P43034 410 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 RPP30P78346 268 aaKnown RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 TSPY1Q01534 308 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 CREB5Q02930 508 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 DLG1Q12959 904 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 CAMK1Q14012 370 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 SLC18A3Q16572 532 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 PRICKLE4Q2TBC4 344 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 KRTAP27-1Q3LI81 207 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 OTUD3Q5T2D3 398 aaPredicted RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 PRSS45Q7RTY3 260 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 VSIG1Q86XK7 387 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 NFKBIDQ8NI38 313 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 AFAP1L1Q8TED9 768 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 APOPT1Q96IL0 206 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 NAP1L5Q96NT1 182 aaPredicted RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 YME1L1Q96TA2 773 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 ADPGKQ9BRR6 497 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TCF7L2Q9NQB0 619 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TLR8Q9NR97 1041 aaKnown RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 TAS2R10Q9NYW0 307 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 ACAD8Q9UKU7 415 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 ZHX1Q9UKY1 873 aaPredicted RBP3.8□□□□□ -1.8
SPG11-218ENST00000559754 HSF4Q9ULV5 492 aa3.8□□□□□ -1.8
SPG11-218ENST00000559754 TYW5A2RUC4 315 aaKnown RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 CLGNO14967 610 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 IGLV2-11P01706 119 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 WEE2P0C1S8 567 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 CSH1P0DML2 217 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 CSH2P0DML3 217 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ZNF8P17098 575 aaPredicted RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 HDAC4P56524 1084 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 IFI35P80217 286 aaPredicted RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 PLIN5Q00G26 463 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 ACSM2AQ08AH3 577 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 EPS8Q12929 822 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 CHAF1BQ13112 559 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 EDRF1Q3B7T1 1238 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 SLC10A5Q5PT55 438 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 NAA16Q6N069 864 aaPredicted RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 RPUSD3Q6P087 351 aaKnown RBP3.79□□□□□ -1.8
SPG11-218ENST00000559754 ATF7IPQ6VMQ6 1270 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 PXKQ7Z7A4 578 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 SNX32Q86XE0 403 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 TEX11Q8IYF3 940 aa3.79□□□□□ -1.8
SPG11-218ENST00000559754 NAGSQ8N159 534 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms