RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC15Q0P6D6 951 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 RALGDSQ12967 914 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 FRG1Q14331 258 aaKnown RBP18.09■□□□□ 0.49
CLPX-203ENST00000558958 PTPRCAPQ14761 206 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 AGBL4Q5VU57 503 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.09■□□□□ 0.49
CLPX-203ENST00000558958 CYS1Q717R9 158 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 SPEM1Q8N4L4 309 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLPX-203ENST00000558958 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 OR13C4Q8NGS5 318 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 DNAJC1Q96KC8 554 aaKnown RBP18.09■□□□□ 0.49
CLPX-203ENST00000558958 C19orf43Q9BQ61 176 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 MFSD1Q9H3U5 465 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 NLE1Q9NVX2 485 aaPredicted RBP18.09■□□□□ 0.49
CLPX-203ENST00000558958 MOCS1Q9NZB8 636 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 SERGEFQ9UGK8 458 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 BDP1A6H8Y1 2624 aa18.09■□□□□ 0.49
CLPX-203ENST00000558958 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 PTSQ03393 145 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 ARHGEF7Q14155 803 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 CASP8Q14790 479 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 TTC31Q49AM3 519 aaPredicted RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 KIAA0930Q6ICG6 404 aaPredicted RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 CBARPQ8N350 705 aaPredicted RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 UHMK1Q8TAS1 419 aaKnown RBP18.08■□□□□ 0.49
CLPX-203ENST00000558958 FBF1Q8TES7 1133 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 PBXIP1Q96AQ6 731 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 OMDQ99983 421 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 FBXL12Q9NXK8 326 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 GGT7Q9UJ14 662 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 ITM2BQ9Y287 266 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 FADS3Q9Y5Q0 445 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 A0A0C4DFX4 3053 aa18.08■□□□□ 0.49
CLPX-203ENST00000558958 A0A087WUV0 522 aaPredicted RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 H0Y858 1186 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 AP1G1O43747 822 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 PDGFBP01127 241 aaPredicted RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 DCNP07585 359 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 PAMP19021 973 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ARNTP27540 789 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 STX2P32856 288 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ARCN1P48444 511 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 ARSDP51689 593 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 STC1P52823 247 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 TAS2R38P59533 333 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 LONRF1Q17RB8 773 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 TMEM52BQ4KMG9 183 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 CWF19L1Q69YN2 538 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 TRMT10BQ6PF06 316 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 KIAA1324Q6UXG2 1013 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 USP30Q70CQ3 517 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 HDXQ7Z353 690 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 UNC5BQ8IZJ1 945 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 IQCKQ8N0W5 287 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 GANCQ8TET4 914 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 HMGB4Q8WW32 186 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 IER2Q9BTL4 223 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 BPIFA1Q9NP55 256 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 RABGEF1Q9UJ41 708 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 PKP3Q9Y446 797 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 BPTFQ12830 3046 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 CCL22O00626 93 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 SLC7A4O43246 635 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 RPP40O75818 363 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 VAPBO95292 243 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 C1QAP02745 245 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 NUDT17P0C025 328 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ACADMP11310 421 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 TMPRSS15P98073 1019 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 SFSWAPQ12872 951 aaKnown RBP18.07■□□□□ 0.48
CLPX-203ENST00000558958 MTAPQ13126 283 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ZNF449Q6P9G9 518 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 LIPIQ6XZB0 460 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 KBTBD6Q86V97 674 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 TSTD1Q8NFU3 115 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 HDAC10Q969S8 669 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 CERS2Q96G23 380 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 CDKN2AIPNLQ96HQ2 116 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 TBATAQ96M53 351 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ACSS3Q9H6R3 686 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 ZNF446Q9NWS9 450 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 DLGAP2Q9P1A6 1054 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 FZD4Q9ULV1 537 aa18.07■□□□□ 0.48
CLPX-203ENST00000558958 NEMP1O14524 444 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 TSPAN6O43657 245 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 SHBGP04278 402 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 C1SP09871 688 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 ELFN1P0C7U0 828 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 HADHAP40939 763 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 MAGEA9P43362 315 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 LIG3P49916 1009 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 PDPK2PQ6A1A2 396 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 HSD11B1LQ7Z5J1 315 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 HHIPQ96QV1 700 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 WRAP53Q9BUR4 548 aaKnown RBP18.06■□□□□ 0.48
CLPX-203ENST00000558958 SUDS3Q9H7L9 328 aaPredicted RBP18.06■□□□□ 0.48
CLPX-203ENST00000558958 C20orf96Q9NUD7 363 aaPredicted RBP18.06■□□□□ 0.48
CLPX-203ENST00000558958 IL1RAPL1Q9NZN1 696 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms