RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 DOK6Q6PKX4 331 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 MFSD7Q6UXD7 560 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 CCDC13Q8IYE1 715 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 PLD5Q8N7P1 536 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 FAM181AQ8N9Y4 354 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 LPCAT1Q8NF37 534 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ARRDC2Q8TBH0 407 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 RFFLQ8WZ73 363 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 MAML1Q92585 1016 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 TMEM168Q9H0V1 697 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 SAE1Q9UBE0 346 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 GPR34Q9UPC5 381 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 WDFY3Q8IZQ1 3526 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 LMO7DNF2Z398 122 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-208ENST00000558827 APOL1O14791 398 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 CSO75390 466 aaKnown RBP12.52□□□□□ -0.41
SMAD3-208ENST00000558827 CD86P42081 329 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 MARCKSL1P49006 195 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 RAET1GQ6H3X3 334 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-208ENST00000558827 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 TAF8Q7Z7C8 310 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 TRIM74Q86UV6 250 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 Q8N9G6 341 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-208ENST00000558827 KYQ8NBH2 561 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 SCAMP4Q969E2 229 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 CRELD1Q96HD1 420 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 TSGA13Q96PP4 275 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 AGAP2Q99490 1192 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 WDR26Q9H7D7 661 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 PADI4Q9UM07 663 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 TMEM98Q9Y2Y6 226 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
SMAD3-208ENST00000558827 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-208ENST00000558827 PMS2P1A4D2B8 440 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 B4DGG1 531 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 TLX3O43711 291 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 MTA2O94776 668 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 CLDN7O95471 211 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 PRLP01236 227 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 FUCA1P04066 466 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 MPOP05164 745 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 PIRTP0C851 137 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 CDK4P11802 303 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 MX2P20592 715 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 GNPDA1P46926 289 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 BLKP51451 505 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 GALNT3Q14435 633 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 AGERQ15109 404 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 ELOCQ15369 112 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 PCSK7Q16549 785 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 COL28A1Q2UY09 1125 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 USP45Q70EL2 814 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 MARK2Q7KZI7 788 aaKnown RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 CNTD1Q8N815 330 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 DCBLD1Q8N8Z6 715 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 HAUS1Q96CS2 278 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 DTD2Q96FN9 168 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 NAF1Q96HR8 494 aaKnown RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 BOCQ9BWV1 1114 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 CARS2Q9HA77 564 aaKnown RBP12.51□□□□□ -0.41
SMAD3-208ENST00000558827 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 ALG6Q9Y672 507 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 UNC13CQ8NB66 2214 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
SMAD3-208ENST00000558827 LRP4O75096 1905 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 A0A0J9YYE9 177 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 EME2A4GXA9 379 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 TOR1BO14657 336 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 TPP1O14773 563 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms