RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 GMNCA6NCL1 334 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 GOLGA8CPA6NN73 597 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 TM9SF1O15321 606 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 PHGDHO43175 533 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 GPR39O43194 453 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 HLA-EP13747 358 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 FOXN2P32314 431 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CDKN1CP49918 316 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 IRF9Q00978 393 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 USP10Q14694 798 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 RBM20Q5T481 1227 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 TSPAN33Q86UF1 283 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 BCAS4Q8TDM0 211 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CKAP2Q8WWK9 683 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 SPOCK2Q92563 424 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 ECHDC3Q96DC8 303 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 KLHL32Q96NJ5 620 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CPEB1Q9BZB8 566 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CATSPERZQ9NTU4 200 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 RIMKLBQ9ULI2 386 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 FAM95CA0A1B0GW59 222 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 NPIPB15A6NHN6 443 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 LEFTY1O75610 366 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CLDN7O95471 211 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CTSLP07711 333 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 ETV4P43268 484 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 SOX9P48436 509 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CCT5P48643 541 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 RPL26P61254 145 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 IRX4P78413 519 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 IL9RQ01113 521 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 C16orf46Q6P387 395 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 PHTF2Q8N3S3 785 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 TRMT61BQ9BVS5 477 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 FAM96AQ9H5X1 160 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 ZNF358Q9NW07 568 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 HACD3Q9P035 362 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 RPL26L1Q9UNX3 145 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 CRYL1Q9Y2S2 319 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 PLLPQ9Y342 182 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 WASF2Q9Y6W5 498 aa20.42■□□□□ 0.86
SNRPA1-205ENST00000558036 TBC1D3BA6NDS4 549 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 TCP11X1B4DZS4 312 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 SOX1O00570 391 aaPredicted RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 S1PR4O95977 384 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ASLP04424 464 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 SRPRAP08240 638 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 CRHR1P34998 444 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 MAGEA12P43365 314 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 LEPRP48357 1165 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ST8SIA6P61647 398 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 RAD51Q06609 339 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ARSIQ5FYB1 569 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 GDPD4Q6W3E5 623 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 KIAA0408Q6ZU52 694 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 CEP97Q8IW35 865 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 TERB1Q8NA31 727 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ARMC2Q8NEN0 867 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ISL2Q96A47 359 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ELMO2Q96JJ3 720 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ZNF317Q96PQ6 595 aaPredicted RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 HEPHQ9BQS7 1158 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ZFYVE1Q9HBF4 777 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 IL17CQ9P0M4 197 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 SLC8A2Q9UPR5 921 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 A0A096LPK6 155 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 CAPN8A6NHC0 703 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 WASH3PC4AMC7 463 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 DNAJC6O75061 913 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 MC4RP32245 332 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 HMGCLP35914 325 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 SF3A3Q12874 501 aaKnown RBP eCLIP20.41■□□□□ 0.869e-7■■■■■ 38.9
SNRPA1-205ENST00000558036 COL19A1Q14993 1142 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 FNDC3BQ53EP0 1204 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 RAPH1Q70E73 1250 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 PLD6Q8N2A8 252 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 ACMSDQ8TDX5 336 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 CHMP6Q96FZ7 201 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 CCDC134Q9H6E4 229 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 PKP3Q9Y446 797 aa20.41■□□□□ 0.86
SNRPA1-205ENST00000558036 C2P06681 752 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 VIMP08670 466 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 CDKN3Q16667 212 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 MRNIPQ6NTE8 343 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 PIANPQ8IYJ0 282 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 LRRC34Q8IZ02 419 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 ZNF641Q96N77 438 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 CCT8L2Q96SF2 557 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 FBRSL1Q9HCM7 1045 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 MKS1Q9NXB0 559 aa20.4■□□□□ 0.86
SNRPA1-205ENST00000558036 ARNTLO00327 626 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 ECI2O75521 394 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 TAS2R39P59534 338 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 PEX6Q13608 980 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 ZKSCAN8Q15776 578 aaPredicted RBP20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 FASTKD1Q53R41 847 aaKnown RBP20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 AFTPHQ6ULP2 937 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 LRCH3Q96II8 777 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 OMDQ99983 421 aa20.39■□□□□ 0.86
SNRPA1-205ENST00000558036 MECRQ9BV79 373 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms