RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 HNF1BP35680 557 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 ATP5OP48047 213 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 XRCC4Q13426 336 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 LLGL1Q15334 1064 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 CNGA3Q16281 694 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 TAZQ16635 292 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 TEX44Q53QW1 395 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 ZC3H18Q86VM9 953 aaKnown RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 HID1Q8IV36 788 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 RAVER1Q8IY67 606 aaKnown RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 SDR16C5Q8N3Y7 309 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 PNPLA1Q8N8W4 532 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 ZNF548Q8NEK5 533 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 PIH1D2Q8WWB5 315 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 MCCC1Q96RQ3 725 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 MLPHQ9BV36 600 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 SCNM1Q9BWG6 230 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 HEMGNQ9BXL5 484 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 OSBPL8Q9BZF1 889 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 LACRTQ9GZZ8 138 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 PPIL1Q9Y3C6 166 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 OR1A2Q9Y585 309 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 DUSP10Q9Y6W6 482 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 ARID1BQ8NFD5 2236 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 RCCD1A6NED2 376 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 TPP1O14773 563 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 HOXC4P09017 264 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 GPR1P46091 355 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 KIAA1024LP59773 190 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 SRP54P61011 504 aaKnown RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 E2F1Q01094 437 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 PEX6Q13608 980 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 SLC14A2Q15849 920 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 LRRC66Q68CR7 880 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 RAET1GQ6H3X3 334 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 ESRP1Q6NXG1 681 aaKnown RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 ZCCHC8Q6NZY4 707 aaKnown RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 BBS12Q6ZW61 710 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 RAB44Q7Z6P3 723 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 GKN2Q86XP6 184 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 TTC13Q8NBP0 860 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 ARRDC2Q8TBH0 407 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 LRRN4Q8WUT4 740 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 KRT35Q92764 455 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 DTD2Q96FN9 168 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 ALS2CR12Q96Q35 445 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 DESI2Q9BSY9 194 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 GLOD4Q9HC38 313 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 RAD18Q9NS91 495 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 TRHDEQ9UKU6 1024 aa13.82□□□□□ -0.2
VPS33B-206ENST00000557358 REXO2Q9Y3B8 237 aaKnown RBP13.82□□□□□ -0.2
VPS33B-206ENST00000557358 C1orf232A0A0U1RR37 186 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 GRID2IPA4D2P6 1211 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 ANKRD66B4E2M5 251 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 TNFRSF10CO14798 259 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 FZD6O60353 706 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PDHA1P08559 390 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PTPN3P26045 913 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PTPN7P35236 360 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 HK3P52790 923 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 CDK18Q07002 472 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 ZBTB17Q13105 803 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 EIF2B5Q13144 721 aaKnown RBP13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PRKD1Q15139 912 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-206ENST00000557358 ITPRIPL1Q6GPH6 555 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PID1Q7Z2X4 250 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 KANSL1Q7Z3B3 1105 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 SLCO6A1Q86UG4 719 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 NRSN1Q8IZ57 195 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 SLC25A45Q8N413 288 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 FAM181AQ8N9Y4 354 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 OR56A4Q8NGH8 313 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 AP2M1Q96CW1 435 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
VPS33B-206ENST00000557358 TEKT5Q96M29 485 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 PPP1R2P1Q96PQ5 205 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 RBM15Q96T37 977 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS33B-206ENST00000557358 CEP41Q9BYV8 373 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 ABCG4Q9H172 646 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 UCKL1Q9NWZ5 548 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 SAE1Q9UBE0 346 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-206ENST00000557358 FAM153AQ9UHL3 310 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 MSRB2Q9Y3D2 182 aa13.81□□□□□ -0.2
VPS33B-206ENST00000557358 RGSL1A5PLK6 1076 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms