RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 NT5MQ9NPB1 228 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 HEBP1Q9NRV9 189 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 DNAJC17Q9NVM6 304 aaKnown RBP5.38□□□□□ -1.55
ATXN3-244ENST00000556898 RBM22Q9NW64 420 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATXN3-244ENST00000556898 TMEM51Q9NW97 253 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
ATXN3-244ENST00000556898 UBP1Q9NZI7 540 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 KLHL8Q9P2G9 620 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-244ENST00000556898 PCYOX1Q9UHG3 505 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 VPS51Q9UID3 782 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 SLCO3A1Q9UIG8 710 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 GGA2Q9UJY4 613 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 VPS28Q9UK41 221 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 U3KQE9 123 aa5.38□□□□□ -1.55
ATXN3-244ENST00000556898 NYNRINQ9P2P1 1898 aaKnown RBP5.38□□□□□ -1.55
ATXN3-244ENST00000556898 TYW5A2RUC4 315 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 SHISA7A6NL88 538 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 EFCAB8A8MWE9 144 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 HACD1B0YJ81 288 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MATN3O15232 486 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TP73O15350 636 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 HOXC11O43248 304 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CACNG3O60359 315 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PRAMEF11O60813 436 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 BANF1O75531 89 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TMEM63AO94886 807 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MYBL2P10244 700 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PABPC1P11940 636 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 SRCP12931 536 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CCNCP24863 283 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 IVDP26440 423 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PSMB4P28070 264 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ECHS1P30084 290 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GRIA1P42261 906 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 WASP42768 502 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CXCL12P48061 93 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CARSP49589 748 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GALK1P51570 392 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CCR3P51677 355 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PLK1P53350 603 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 YBEYP58557 167 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 VSNL1P62760 191 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 IFI35P80217 286 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 DSC2Q02487 901 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GPS1Q13098 491 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MTA1Q13330 715 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PWP1Q13610 501 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 DHX34Q14147 1143 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 P3H1Q32P28 736 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PLEKHG6Q3KR16 790 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PARP15Q460N3 678 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MPP7Q5T2T1 576 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ATXN7L2Q5T6C5 722 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 UBAP2Q5T6F2 1119 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ACBD5Q5T8D3 534 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 EMC10Q5UCC4 262 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 IZUMO3Q5VZ72 239 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 HEATR6Q6AI08 1181 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GRAMD4Q6IC98 578 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 OGFOD3Q6PK18 319 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PID1Q7Z2X4 250 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 KIAA0907Q7Z7F0 614 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 SETD3Q86TU7 594 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CPA6Q8N4T0 437 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MYRIPQ8NFW9 859 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 OR6K2Q8NGY2 324 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 SPATA22Q8NHS9 363 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CCDC26Q8TAB7 109 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 IFT81Q8WYA0 676 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 UBXN4Q92575 508 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MAML1Q92585 1016 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ATP2A3Q93084 1043 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 E2F7Q96AV8 911 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ZBTB9Q96C00 473 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 OTUB2Q96DC9 234 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 OXNAD1Q96HP4 312 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TEKT5Q96M29 485 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TSGA13Q96PP4 275 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 SMIM14Q96QK8 99 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 XPO6Q96QU8 1125 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ACOX2Q99424 681 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 IL12RB2Q99665 862 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 FRMD8P1Q9BZ68 369 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TNKS2Q9H2K2 1166 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 LMAN1LQ9HAT1 526 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PRDM16Q9HAZ2 1276 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GDF3Q9NR23 364 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 POLR3BQ9NW08 1133 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 PIH1D1Q9NWS0 290 aaKnown RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 GRHL1Q9NZI5 618 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 CRIM1Q9NZV1 1036 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 LHX3Q9UBR4 397 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 UBA2Q9UBT2 640 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-244ENST00000556898 ASIC3Q9UHC3 531 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 TTLL3Q9Y4R7 772 aa5.37□□□□□ -1.55
ATXN3-244ENST00000556898 KIF26AQ9ULI4 1882 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms