RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 OR6C4Q8NGE1 309 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 FNIP1Q8TF40 1166 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 ZDHHC1Q8WTX9 485 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 HTR3CQ8WXA8 447 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 CMKLR1Q99788 373 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 ZMYND15Q9H091 742 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 LIMA1Q9UHB6 759 aaKnown RBP14.8□□□□□ -0.04
CHD8-211ENST00000556833 APPL1Q9UKG1 709 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 PLEKHM1Q9Y4G2 1056 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 TRAFD1O14545 582 aaPredicted RBP14.79□□□□□ -0.04
CHD8-211ENST00000556833 NVLO15381 856 aaKnown RBP14.79□□□□□ -0.04
CHD8-211ENST00000556833 B4GAT1O43505 415 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 WISP1O95388 367 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ECEL1O95672 775 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 CPP00450 1065 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 FUCA1P04066 466 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 CTPS1P17812 591 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 KELP23276 732 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 MIPP30301 263 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ETV3P41162 512 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 B4GALNT1Q00973 533 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ZNF235Q14590 738 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 LBRQ14739 615 aaKnown RBP14.79□□□□□ -0.04
CHD8-211ENST00000556833 SMTNL2Q2TAL5 461 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 OGFOD3Q6PK18 319 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 RFLNAQ6ZTI6 216 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 CYP4V2Q6ZWL3 525 aaPredicted RBP14.79□□□□□ -0.04
CHD8-211ENST00000556833 HSD11B1LQ7Z5J1 315 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 TSPAN33Q86UF1 283 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ZNF761Q86XN6 746 aaPredicted RBP14.79□□□□□ -0.04
CHD8-211ENST00000556833 NRROSQ86YC3 692 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHD8-211ENST00000556833 ANKRD20A12PQ8NF67 263 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 KIAA1524Q8TCG1 905 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ECHDC3Q96DC8 303 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 CCDC74BQ96LY2 380 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 SMIM14Q96QK8 99 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 ETNK2Q9NVF9 386 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 SEPT10Q9P0V9 454 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 TAAR2Q9P1P5 351 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 MYO1AQ9UBC5 1043 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 CD84Q9UIB8 345 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 SUFUQ9UMX1 484 aa14.79□□□□□ -0.04
CHD8-211ENST00000556833 TRBV23OR9-2A0A075B6M9 112 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PRPSAP2O60256 369 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 FGF1P05230 155 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 MYCLP1P12525 358 aaPredicted RBP14.78□□□□□ -0.04
CHD8-211ENST00000556833 ATP1A3P13637 1013 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 CCNB1P14635 433 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 TCF4P15884 667 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 FERP16591 822 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 CSNK1DP48730 415 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 MYL5Q02045 173 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 IL10RBQ08334 325 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 TBR1Q16650 682 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 CT47A1Q5JQC4 288 aaPredicted RBP14.78□□□□□ -0.04
CHD8-211ENST00000556833 AFMIDQ63HM1 303 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 RAET1GQ6H3X3 334 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
CHD8-211ENST00000556833 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PIM3Q86V86 326 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PGBD5Q8N414 524 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 HSPH1Q92598 858 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 RNF31Q96EP0 1072 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 COQ10AQ96MF6 247 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PHPT1Q9NRX4 125 aaPredicted RBP14.78□□□□□ -0.04
CHD8-211ENST00000556833 LMBRD1Q9NUN5 540 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 CWC15Q9P013 229 aaKnown RBP14.78□□□□□ -0.04
CHD8-211ENST00000556833 TMEM9Q9P0T7 183 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 SEPT3Q9UH03 358 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 PCDHB11Q9Y5F2 797 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 ST14Q9Y5Y6 855 aa14.78□□□□□ -0.04
CHD8-211ENST00000556833 NPIPB15A6NHN6 443 aaPredicted RBP14.77□□□□□ -0.05
CHD8-211ENST00000556833 TNFRSF10CO14798 259 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ARHGAP6O43182 974 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 NUDT21O43809 227 aaKnown RBP14.77□□□□□ -0.05
CHD8-211ENST00000556833 RNF8O76064 485 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 CEACAM5P06731 702 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 LHCGRP22888 699 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 AMPD1P23109 780 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 VIPR1P32241 457 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 HTR7P34969 479 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 TRIM23P36406 574 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 AP1S1P61966 158 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 POLR2LP62875 67 aaKnown RBP14.77□□□□□ -0.05
CHD8-211ENST00000556833 ILF3Q12906 894 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■■■■□ 21.6
CHD8-211ENST00000556833 TRAF2Q12933 501 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 CLCA4Q14CN2 919 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 TMCO4Q5TGY1 634 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ZNF574Q6ZN55 896 aaPredicted RBP14.77□□□□□ -0.05
CHD8-211ENST00000556833 AOPEPQ8N6M6 819 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ZNF653Q96CK0 615 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ERGIC2Q96RQ1 377 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 GSDMCQ9BYG8 508 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ZWILCHQ9H900 591 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 NOD2Q9HC29 1040 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 ACSL6Q9UKU0 697 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 TMEM98Q9Y2Y6 226 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms