RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IFI16Q16666 785 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 LVRNQ6Q4G3 990 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ENPP7Q6UWV6 458 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MACC1Q6ZN28 852 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ARHGAP36Q6ZRI8 547 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CYP4V2Q6ZWL3 525 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 USP45Q70EL2 814 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 KANSL1Q7Z3B3 1105 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 GKN2Q86XP6 184 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 HID1Q8IV36 788 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 RHOT2Q8IXI1 618 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CACTIN-AS1Q8N1I8 211 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CCNYQ8ND76 341 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MDM1Q8TC05 714 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 NAT6Q93015 286 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ECHDC3Q96DC8 303 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TBATAQ96M53 351 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 NUDCD1Q96RS6 583 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF670Q9BS34 389 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 APOOQ9BUR5 198 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TRIM5Q9C035 493 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 POLR1EQ9GZS1 481 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 NHEJ1Q9H9Q4 299 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MBNL1Q9NR56 388 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 GPR27Q9NS67 375 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ABHD10Q9NUJ1 306 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 DKK4Q9UBT3 224 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 AMACRQ9UHK6 382 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PHTF1Q9UMS5 762 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 COQ6Q9Y2Z9 468 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TTLL3Q9Y4R7 772 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TNRC6BQ9UPQ9 1833 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 A8MX80 341 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 AKR1B15C9JRZ8 316 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-222ENST00000556768 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 RRP8O43159 456 aaKnown RBP7.35□□□□□ -1.23
SCFD1-222ENST00000556768 SPINT1O43278 529 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 RECQL5O94762 991 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-222ENST00000556768 TNFP01375 233 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 PCCBP05166 539 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 TMEM253P0C7T8 217 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 TCF4P15884 667 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 CCNCP24863 283 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 HK3P52790 923 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 SEMG2Q02383 582 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 MTM1Q13496 603 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 PEX6Q13608 980 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 MESDQ14696 234 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 IRF4Q15306 451 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 NR0B2Q15466 257 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 WSCD2Q2TBF2 565 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 DEFB133Q30KQ1 61 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 ANKRD20A8PQ5CZ79 823 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 ARMC12Q5T9G4 340 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 LRRC69Q6ZNQ3 347 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 TREML1Q86YW5 311 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 VSTM4Q8IW00 320 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 LSMEM2Q8N112 164 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 TP53I13Q8NBR0 393 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-222ENST00000556768 OR6C4Q8NGE1 309 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 WDR48Q8TAF3 677 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 SLC35G2Q8TBE7 412 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 MAPK15Q8TD08 544 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 GRAMD1AQ96CP6 724 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 PHACTR1Q9C0D0 580 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 NRSN2Q9GZP1 204 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 WDR26Q9H7D7 661 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 NOD2Q9HC29 1040 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 NT5MQ9NPB1 228 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 ETNK2Q9NVF9 386 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 KLQ9UEF7 1012 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 OR1A2Q9Y585 309 aa7.35□□□□□ -1.23
SCFD1-222ENST00000556768 CEP192Q8TEP8 1941 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GOLGA6CA6NDK9 693 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GOLGA6BA6NDN3 693 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 TRAFD1O14545 582 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MATN3O15232 486 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 YY2O15391 372 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 SIAH2O43255 324 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 ZW10O43264 779 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 OPA1O60313 960 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 CPNE3O75131 537 aaKnown RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 IPO7O95373 1038 aaKnown RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MT-CO3P00414 261 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 CPP00450 1065 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GOLGA6DP0CG33 693 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 CCNB1P14635 433 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 TSHRP16473 764 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 ZFXP17010 805 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 IL4RP24394 825 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MAN1A1P33908 653 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 IGFALSP35858 605 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GARSP41250 739 aaKnown RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 SLC1A1P43005 524 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 RGRP47804 291 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 SRP54P61011 504 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms