RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CYP2A6P11509 494 aaPredicted RBP22.62■■□□□ 1.21
ACTN1-220ENST00000556433 MMP13P45452 471 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 KIF26BQ2KJY2 2108 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 RALGPS1Q5JS13 557 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 B3GNT8Q7Z7M8 397 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 Q8N9G6 341 aaPredicted RBP22.62■■□□□ 1.21
ACTN1-220ENST00000556433 LSM14AQ8ND56 463 aaKnown RBP22.62■■□□□ 1.21
ACTN1-220ENST00000556433 CCL4L1Q8NHW4 92 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 DPEP2Q9H4A9 486 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 EPB41L5Q9HCM4 733 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 KCTD5Q9NXV2 234 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 CDRT15L2A8MXV6 281 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 IL4RP24394 825 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 MLLT3P42568 568 aaPredicted RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 MMRN1Q13201 1228 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 TSR1Q2NL82 804 aaKnown RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 CCDC122Q5T0U0 273 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 ARMC12Q5T9G4 340 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 ARHGAP40Q5TG30 622 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 ALKBH5Q6P6C2 394 aaKnown RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 HSD11B1LQ7Z5J1 315 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 SFTPA2Q8IWL1 248 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 CBARPQ8N350 705 aaPredicted RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 CCDC97Q96F63 343 aaPredicted RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 LIN37Q96GY3 246 aaPredicted RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 SMG1Q96Q15 3661 aaKnown RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 FOXP3Q9BZS1 431 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 STRADBQ9C0K7 418 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 NT5MQ9NPB1 228 aa22.61■■□□□ 1.21
ACTN1-220ENST00000556433 PHPT1Q9NRX4 125 aaPredicted RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 LUC7L2Q9Y383 392 aaKnown RBP22.61■■□□□ 1.21
ACTN1-220ENST00000556433 PRSS38A1L453 326 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 B4DGG1 531 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 D6RAR5 112 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 NOBOXO60393 691 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 PGLSO95336 258 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 CD48P09326 243 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 MYCLP1P12525 358 aaPredicted RBP22.6■■□□□ 1.21
ACTN1-220ENST00000556433 GLB1P16278 677 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 LHCGRP22888 699 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 ETV3P41162 512 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 INHBCP55103 352 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 SKOR1P84550 965 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 C19orf57Q0VDD7 668 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 ARHGEF7Q14155 803 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 PTPRRQ15256 657 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 HADHQ16836 314 aaKnown RBP22.6■■□□□ 1.21
ACTN1-220ENST00000556433 C14orf28Q4W4Y0 310 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 CERCAMQ5T4B2 595 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 RAB11FIP2Q7L804 512 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 HEATR4Q86WZ0 1026 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 LRRC49Q8IUZ0 686 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 CCNJLQ8IV13 435 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 FBXO39Q8N4B4 442 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 IQCDQ96DY2 449 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 DTD2Q96FN9 168 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 SCRN2Q96FV2 425 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 TMEM74Q96NL1 305 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 SUDS3Q9H7L9 328 aaPredicted RBP22.6■■□□□ 1.21
ACTN1-220ENST00000556433 CARS2Q9HA77 564 aaKnown RBP22.6■■□□□ 1.21
ACTN1-220ENST00000556433 RCOR3Q9P2K3 495 aaPredicted RBP22.6■■□□□ 1.21
ACTN1-220ENST00000556433 LRIT1Q9P2V4 623 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 APPL1Q9UKG1 709 aa22.6■■□□□ 1.21
ACTN1-220ENST00000556433 LRP4O75096 1905 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 NPIPB15A6NHN6 443 aaPredicted RBP22.59■■□□□ 1.21
ACTN1-220ENST00000556433 GOLGA6L19H0YKK7 550 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 PLD2O14939 933 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 PNLIPP16233 465 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 CTPS1P17812 591 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 ITKQ08881 620 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 SPECC1LQ69YQ0 1117 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 Q6ZVL8 140 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 CLEC14AQ86T13 490 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 TEX26Q8N6G2 289 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 FAM71BQ8TC56 605 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 TEX101Q9BY14 249 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 RNF215Q9Y6U7 377 aa22.59■■□□□ 1.21
ACTN1-220ENST00000556433 GOLGA6CA6NDK9 693 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 GOLGA6BA6NDN3 693 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 PSMD11O00231 422 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 CEACAM5P06731 702 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 ITGA2BP08514 1039 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 GOLGA6DP0CG33 693 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 UGT1A5P35504 534 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 VAC14Q08AM6 782 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 EIF3IQ13347 325 aaKnown RBP22.58■■□□□ 1.21
ACTN1-220ENST00000556433 HLTFQ14527 1009 aaKnown RBP eCLIP22.58■■□□□ 1.21
ACTN1-220ENST00000556433 ATP13A4Q4VNC1 1196 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 USP45Q70EL2 814 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 TSPAN33Q86UF1 283 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 NDUFAF2Q8N183 169 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 GPBAR1Q8TDU6 330 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 PIH1D2Q8WWB5 315 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 MCCC1Q96RQ3 725 aaPredicted RBP22.58■■□□□ 1.21
ACTN1-220ENST00000556433 SEMA3CQ99985 751 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 SPATS2LQ9NUQ6 558 aaKnown RBP22.58■■□□□ 1.21
ACTN1-220ENST00000556433 GOLGA6AQ9NYA3 693 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 ATXN7L1Q9ULK2 861 aaPredicted RBP22.58■■□□□ 1.21
ACTN1-220ENST00000556433 SSUH2Q9Y2M2 353 aa22.58■■□□□ 1.21
ACTN1-220ENST00000556433 PPIL1Q9Y3C6 166 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms