RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 RNF10Q8N5U6 811 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 EIF1ADQ8N9N8 165 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SUMF1Q8NBK3 374 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TRIM58Q8NG06 486 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SPPL2BQ8TCT7 592 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 C2orf15Q8WU43 125 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 NELFBQ8WX92 580 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SYN2Q92777 582 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 HVCN1Q96D96 273 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SAAL1Q96ER3 474 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 MSANTD3Q96H12 275 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ANKRD36BP1Q96IX9 119 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF560Q96MR9 790 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 MED15Q96RN5 788 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ERGIC2Q96RQ1 377 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 EIF3CQ99613 913 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 C7orf25Q9BPX7 421 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RTKNQ9BST9 563 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZCWPW1Q9H0M4 648 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SNX25Q9H3E2 840 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 EBF3Q9H4W6 596 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM206Q9H813 350 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ANKZF1Q9H8Y5 726 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TRPV4Q9HBA0 871 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GALNT9Q9HCQ5 603 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TRPV5Q9NQA5 729 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 BLOC1S4Q9NUP1 217 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TDP1Q9NUW8 608 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KLHL11Q9NVR0 708 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 DUS2Q9NX74 493 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RBAKQ9NYW8 714 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GTSE1Q9NYZ3 720 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 UXTQ9UBK9 157 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SEL1LQ9UBV2 794 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CPSF3Q9UKF6 684 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ADAM21Q9UKJ8 722 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TMPRSS11EQ9UL52 423 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 C2CD2Q9Y426 696 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SNX9Q9Y5X1 595 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SAR1BQ9Y6B6 198 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ATP8B3O60423 1300 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 DMXL1Q9Y485 3027 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GOLGA4Q13439 2230 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ACACBO00763 2458 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 NCOR2Q9Y618 2525 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TRAV19A0A0A6YYK7 116 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 MED19A0JLT2 244 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 MYBPHLA2RUH7 354 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 MYMKA6NI61 221 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SRRM3A6NNA2 597 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TISP43B9A030 160 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TEX33O43247 280 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 EXTL3O43909 919 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 RHOBTB1O94844 696 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 LCA5LO95447 670 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 GNA14O95837 355 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 GPANK1O95872 356 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ADRB2P07550 413 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TCP1P17987 556 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 HDCP19113 662 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TNNI1P19237 187 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ACAT1P24752 427 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CYP2F1P24903 491 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ANXA13P27216 316 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TNFRSF8P28908 595 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ECHS1P30084 290 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 GNL1P36915 607 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ARHGAP25P42331 645 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PXNP49023 591 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 DGKEP52429 567 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF131P52739 623 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CXADRP78310 365 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ASIC1P78348 528 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 POU5F1Q01860 360 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 UBXN1Q04323 297 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 OCA2Q04671 838 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 LRRC63Q05C16 580 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 KIF5AQ12840 1032 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SRSF5Q13243 272 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TRPC3Q13507 836 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ALCAMQ13740 583 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PDGFRLQ15198 375 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SPA17Q15506 151 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 UGT8Q16880 541 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PITRM1Q5JRX3 1037 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TXNDC8Q6A555 127 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SLC39A4Q6P5W5 647 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 C4orf50Q6ZRC1 276 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 USP49Q70CQ1 688 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 BHLHA9Q7RTU4 235 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CACNA2D4Q7Z3S7 1137 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SPATS2Q86XZ4 545 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TMC8Q8IU68 726 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CMTM8Q8IZV2 173 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM86AQ8N2M4 240 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CPA6Q8N4T0 437 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms