RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 YWHAZP63104 245 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 PPP2CAP67775 309 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 GCNT1Q02742 428 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 LRRC63Q05C16 580 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 STAT4Q14765 748 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 MEA1Q16626 185 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 TBC1D25Q3MII6 688 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 NEK5Q6P3R8 708 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 GPR155Q7Z3F1 870 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 B3GNT8Q7Z7M8 397 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 CCDC117Q8IWD4 279 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 LGI2Q8N0V4 545 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 WBP1Q96G27 269 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 HIC2Q96JB3 615 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 SPAG5Q96R06 1193 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 FEM1AQ9BSK4 669 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 MIS12Q9H081 205 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 KLHL11Q9NVR0 708 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 PMF1-BGLAPU3KQ54 211 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 X6R8D5 127 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 ZNF462Q96JM2 2506 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 PLXNA2O75051 1894 aa9.17□□□□□ -0.94
GTF2A1-204ENST00000556268 PRAMEF26H0Y7S4 382 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 M0QYV0 167 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 DLX3O60479 287 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 RTN2O75298 545 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 TRUB2O95900 331 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 MT-CO3P00414 261 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 CENPBP07199 599 aaPredicted RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 DGKAP23743 735 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 NNMTP40261 264 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 CNTN1Q12860 1018 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 PNOCQ13519 176 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 C5orf22Q49AR2 442 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 DCAF17Q5H9S7 520 aaPredicted RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 MROH9Q5TGP6 573 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 AGBL4Q5VU57 503 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 FAM46CQ5VWP2 391 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 CXorf57Q6NSI4 855 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 FOXR2Q6PJQ5 311 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 RRAGAQ7L523 313 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 TAC4Q86UU9 113 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 HSCBQ8IWL3 235 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 CCAR2Q8N163 923 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 LINC01356Q8N9X3 169 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 FNIP1Q8TF40 1166 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 NT5C1BQ96P26 610 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 MED15Q96RN5 788 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 PPP1R9BQ96SB3 815 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 TSG101Q99816 390 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 AARSD1Q9BTE6 412 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 TRIM62Q9BVG3 475 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 THAP9Q9H5L6 903 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 ZCCHC4Q9H5U6 513 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 NPFFR2Q9Y5X5 522 aa9.16□□□□□ -0.94
GTF2A1-204ENST00000556268 MYLKQ15746 1914 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 CAPN8A6NHC0 703 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 FFAR3O14843 346 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 ALOX15BO15296 676 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 CKMT1AP12532 417 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 PLA2G2AP14555 144 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 PDGFRAP16234 1089 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 LSSP48449 732 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 PITX1P78337 314 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 TAF5Q15542 800 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 DLG2Q15700 870 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 VWA3BQ502W6 1294 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 LCE1DQ5T752 114 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 RNF219Q5W0B1 726 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 RAP1GAP2Q684P5 730 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 FBXL22Q6P050 247 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 DENND1BQ6P3S1 775 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 ELOA2Q8IYF1 753 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 PPM1KQ8N3J5 372 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 WDTC1Q8N5D0 677 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 TP53I13Q8NBR0 393 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 OR52K2Q8NGK3 314 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 OR4C6Q8NH72 309 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 SNRNP27Q8WVK2 155 aaKnown RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 ZNF606Q8WXB4 792 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 OR8D1Q8WZ84 308 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 SEC14L1Q92503 715 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 ERCC4Q92889 916 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 CCDC34Q96HJ3 373 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 ZNF578Q96N58 590 aaPredicted RBP9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC2A13Q96QE2 648 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 POPDC2Q9HBU9 364 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 PREBQ9HCU5 417 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC12A6Q9UHW9 1150 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 TBC1D30Q9Y2I9 924 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 HS3ST3A1Q9Y663 406 aa9.15□□□□□ -0.94
GTF2A1-204ENST00000556268 DOCK9Q9BZ29 2069 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms