RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SAMD15Q9P1V8 674 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 FAM237BA0A1B0GVD1 139 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 A8MX80 341 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 STX7O15400 261 aaKnown RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 LDB2O43679 373 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 MMP20O60882 483 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 RNGTTO60942 597 aaKnown RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NDUFS2O75306 463 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 LHCGRP22888 699 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NUDT1P36639 197 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 HADHAP40939 763 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 FNTBP49356 437 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CCR5P51681 352 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 STC1P52823 247 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 DHX9Q08211 1270 aaKnown RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 SGCGQ13326 291 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 AGERQ15109 404 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 PTPRRQ15256 657 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CNGA3Q16281 694 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 BBS9Q3SYG4 887 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CASC4Q6P4E1 433 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 LYSMD3Q7Z3D4 306 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CYP2U1Q7Z449 544 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 TRIM69Q86WT6 500 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 RELL1Q8IUW5 271 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NRSN1Q8IZ57 195 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 DTX3LQ8TDB6 740 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 FMO2Q99518 471 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 EBNA1BP2Q99848 306 aaKnown RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CHRAC1Q9NRG0 131 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 PKD2L2Q9NZM6 624 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 IL17CQ9P0M4 197 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 SOX13Q9UN79 622 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 PKP3Q9Y446 797 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 TCAF1Q9Y4C2 921 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-221ENST00000555773 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
SHMT2-221ENST00000555773 A0A1W2PQU0 124 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 C10orf142B7Z368 130 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 WNT9AO14904 365 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 AURKAO14965 403 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 MAP3K13O43283 966 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-221ENST00000555773 LZTS3O60299 673 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TM7SF2O76062 418 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TTC4O95801 387 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 ECHS1P30084 290 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SPINT3P49223 89 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SEMG2Q02383 582 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 DMWDQ09019 674 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SEPT6Q14141 434 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SLMAPQ14BN4 828 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 ACOX1Q15067 660 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 ANGPT1Q15389 498 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TMEM259Q4ZIN3 620 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 CCDC38Q502W7 563 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SPDYCQ5MJ68 293 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TSTD2Q5T7W7 516 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 DENND2CQ68D51 928 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TMEM135Q86UB9 458 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 EID2BQ96D98 161 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 STAMBPL1Q96FJ0 436 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 COQ10AQ96MF6 247 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 PWWP2AQ96N64 755 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
SHMT2-221ENST00000555773 C1QTNF7Q9BXJ2 289 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SLC17A9Q9BYT1 436 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 EPC1Q9H2F5 836 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 CD93Q9NPY3 652 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 ZSCAN32Q9NX65 697 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 SYBUQ9NX95 663 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 GGT7Q9UJ14 662 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 ARL5AQ9Y689 179 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 MAD1L1Q9Y6D9 718 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 TEX264Q9Y6I9 313 aa12.46□□□□□ -0.41
SHMT2-221ENST00000555773 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 CTIFO43310 598 aaKnown RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 LATO43561 262 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 RECQL5O94762 991 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-221ENST00000555773 POLBP06746 335 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 C1SP09871 688 aa12.45□□□□□ -0.42
SHMT2-221ENST00000555773 SP9P0CG40 484 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms