RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TNK2Q07912 1038 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 MERTKQ12866 999 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 NFYCQ13952 458 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 RAB39AQ14964 217 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC44A4Q53GD3 710 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 PATL1Q86TB9 770 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 MIB1Q86YT6 1006 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 ERI1Q8IV48 349 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 DQX1Q8TE96 717 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 TCF12Q99081 682 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 INTS7Q9NVH2 962 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 TMLHEQ9NVH6 421 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 TCAF1Q9Y4C2 921 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 DLGAP1O14490 977 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 NOBOXO60393 691 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 SCNN1GP51170 649 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 CBX3Q13185 183 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 IHHQ14623 411 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 SAMD4BQ5PRF9 694 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 MRGPRX2Q96LB1 330 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 EPB41L1Q9H4G0 881 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 PTGESO14684 152 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 XYLBO75191 536 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 B3GAT3O94766 335 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 LTA4HP09960 611 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 MAP4P27816 1152 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 GALNT2Q10471 571 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 SQLEQ14534 574 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 TECRLQ5HYJ1 363 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 AGAP9Q5VTM2 703 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 ABI1Q8IZP0 508 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 PELI3Q8N2H9 469 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 FNDC8Q8TC99 324 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 ABCG8Q9H221 673 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 ADAMTS10Q9H324 1103 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 TRNAU1APQ9NX07 287 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-208ENST00000555462 SUPT3HB4E1H0 165 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 HSPA8P11142 646 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 HSPA13P48723 471 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 UGT3A2Q3SY77 523 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 PAGE3Q5JUK9 113 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TFAP2CQ92754 450 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC25A23Q9BV35 468 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 OSBPL6Q9BZF3 934 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 GSTO2Q9H4Y5 243 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 VWA7Q9Y334 891 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 NRCAMQ92823 1304 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ARPC2O15144 300 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SOAT2O75908 522 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 RSL1D1O76021 490 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 IL10P22301 178 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 PRKACGP22612 351 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MTPNP58546 118 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 DCAF4L1Q3SXM0 396 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SV2CQ496J9 727 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 PRR23BQ6ZRT6 265 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ZNF554Q86TJ5 538 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MIER2Q8N344 545 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MYLPFQ96A32 169 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ISL2Q96A47 359 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 FANCEQ9HB96 536 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SUCOQ9UBS9 1254 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ST14Q9Y5Y6 855 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MAGEB16A2A368 324 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 H3BMQ9 156 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 K7EPI3 171 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 H2AFYO75367 372 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 GPR32O75388 356 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 CNTN5O94779 1100 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 FASP25445 335 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 PSMA4P25789 261 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 VARSP26640 1264 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 UFM1P61960 85 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 SNX17Q15036 470 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 GALNT18Q6P9A2 607 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 LYSMD3Q7Z3D4 306 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MILR1Q7Z6M3 343 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 KCNN1Q92952 543 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 COG8Q96MW5 612 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 MUS81Q96NY9 551 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TBCDQ9BTW9 1192 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 ING2Q9H160 280 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 TIMMDC1Q9NPL8 285 aa17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-208ENST00000555462 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms