RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 GFM1Q96RP9 751 aaKnown RBP5.5□□□□□ -1.53
VRK1-205ENST00000555402 TMEM47Q9BQJ4 181 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 IFIH1Q9BYX4 1025 aaKnown RBP5.5□□□□□ -1.53
VRK1-205ENST00000555402 SUCLA2Q9P2R7 463 aaPredicted RBP5.5□□□□□ -1.53
VRK1-205ENST00000555402 FBXL17Q9UF56 701 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 NENFQ9UMX5 172 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 CEPT1Q9Y6K0 416 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 MAU2Q9Y6X3 613 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 A0A0G2JK05 382 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 A0A0U1RQF3 1178 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 AKR1B15C9JRZ8 316 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 TLX3O43711 291 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 KRT86O43790 486 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 HS6ST1O60243 411 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 KLK8O60259 260 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 GABRB1P18505 474 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 AGAP20933 346 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 RRM1P23921 792 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 FAM27E3Q08E93 113 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 IKQ13123 557 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 KRT81Q14533 505 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 SHBQ15464 509 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 C6orf141Q5SZD1 244 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 KIAA0930Q6ICG6 404 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 SLC35F3Q8IY50 421 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 RBFAQ8N0V3 343 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 ZBTB2Q8N680 514 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 POC5Q8NA72 575 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 BEST2Q8NFU1 509 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 ELMOD3Q96FG2 381 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 WDR77Q9BQA1 342 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 C1QTNF5Q9BXJ0 243 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 POLDIP3Q9BY77 421 aaKnown RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 PDZD7Q9H5P4 517 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 SLC28A3Q9HAS3 691 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 PDE7BQ9NP56 450 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 POT1Q9NUX5 634 aa5.49□□□□□ -1.53
VRK1-205ENST00000555402 CISD1Q9NZ45 108 aaKnown RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 MRPL15Q9P015 296 aaKnown RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 R3HDM2Q9Y2K5 976 aaKnown RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.49□□□□□ -1.53
VRK1-205ENST00000555402 ZMYM2Q9UBW7 1377 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 CHL1O00533 1208 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 CTDSP2O14595 271 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 ERAL1O75616 437 aaKnown RBP5.48□□□□□ -1.53
VRK1-205ENST00000555402 CRYABP02511 175 aaKnown RBP5.48□□□□□ -1.53
VRK1-205ENST00000555402 DNTTP04053 509 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 CHRNB2P17787 502 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 DCTDP32321 178 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 CLCN3P51790 818 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 MFAP4P55083 255 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 MTX1Q13505 466 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 NAE1Q13564 534 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 USP41Q3LFD5 358 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 ZNF628Q5EBL2 1059 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 SGO1Q5FBB7 561 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 BMP2KLQ5H9B9 411 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 QSOX2Q6ZRP7 698 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 SLC16A12Q6ZSM3 486 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 MB21D2Q8IYB1 491 aaPredicted RBP5.48□□□□□ -1.53
VRK1-205ENST00000555402 GABPB2Q8TAK5 448 aaPredicted RBP5.48□□□□□ -1.53
VRK1-205ENST00000555402 SNAPC3Q92966 411 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 HARBI1Q96MB7 349 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 SLITRK1Q96PX8 696 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 SRSF8Q9BRL6 282 aaKnown RBP5.48□□□□□ -1.53
VRK1-205ENST00000555402 TRMOQ9BU70 441 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 TEX12Q9BXU0 123 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 KLHL31Q9H511 634 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 CYSLTR2Q9NS75 346 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 DECR2Q9NUI1 292 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 OGFRQ9NZT2 677 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 ERVK-11Q9UQG0 969 aa5.48□□□□□ -1.53
VRK1-205ENST00000555402 ZNF814B7Z6K7 855 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 H3BNX3 289 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 H3BQ06 376 aaPredicted RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 MDM4O15151 490 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 HCRTR2O43614 444 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 TPPPO94811 219 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 PGM3O95394 542 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 KLKB1P03952 638 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SRPRAP08240 638 aaKnown RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 MMP2P08253 660 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 MYF6P23409 242 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SLC15A1P46059 708 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 CAMPP49913 170 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 PSMC6P62333 389 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 TFAP4Q01664 338 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 ACSM2AQ08AH3 577 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 PRPF4BQ13523 1007 aaKnown RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 ASTE1Q2TB18 679 aaPredicted RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 DCAF6Q58WW2 860 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 ACSM2BQ68CK6 577 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 HIST2H2BCQ6DN03 193 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 HIST2H2BDQ6DRA6 164 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 JADE1Q6IE81 842 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SLC30A6Q6NXT4 461 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 TRILQ7L0X0 811 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 TRAPPC11Q7Z392 1133 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 PIP4P1Q86T03 277 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms