RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 ARHGEF7Q14155 803 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 SLC14A2Q15849 920 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 GLE1Q53GS7 698 aaKnown RBP20.57■□□□□ 0.88
FOXN3-209ENST00000555353 GCNT7Q6ZNI0 430 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 PTAR1Q7Z6K3 402 aaPredicted RBP20.57■□□□□ 0.88
FOXN3-209ENST00000555353 ABI3BPQ7Z7G0 1075 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 FAM71DQ8N9W8 422 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 LPCAT1Q8NF37 534 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 MCCC1Q96RQ3 725 aaPredicted RBP20.57■□□□□ 0.88
FOXN3-209ENST00000555353 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 DNAAF2Q9NVR5 837 aaKnown RBP20.57■□□□□ 0.88
FOXN3-209ENST00000555353 PPIL1Q9Y3C6 166 aa20.57■□□□□ 0.88
FOXN3-209ENST00000555353 A0A0J9YYE9 177 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 NPIPB15A6NHN6 443 aaPredicted RBP20.56■□□□□ 0.88
FOXN3-209ENST00000555353 EFCAB8A8MWE9 144 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 IFNB1P01574 187 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 TRBC1P01850 177 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 NFKB1P19838 968 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 CD68P34810 354 aaPredicted RBP20.56■□□□□ 0.88
FOXN3-209ENST00000555353 NXPH1P58417 271 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 LRRC14Q15048 493 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 ACOX1Q15067 660 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 PCSK7Q16549 785 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 KYAT3Q6YP21 454 aaKnown RBP20.56■□□□□ 0.88
FOXN3-209ENST00000555353 SPATA22Q8NHS9 363 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 CENPTQ96BT3 561 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 IFT43Q96FT9 208 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 DLL3Q9NYJ7 618 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 RSPH14Q9UHP6 348 aa20.56■□□□□ 0.88
FOXN3-209ENST00000555353 POM121BA6NF01 834 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 DFNA5O60443 496 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 HEXIM1O94992 359 aaKnown RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 MT-CYBP00156 380 aaPredicted RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 PRLP01236 227 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 ALPIP09923 528 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 ID4P47928 161 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 PUM1Q14671 1186 aaKnown RBP eCLIP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 CNGA3Q16281 694 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 DENND2CQ68D51 928 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 ITPRIPL1Q6GPH6 555 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 C4orf22Q6V702 233 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 Q6ZSR6 202 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 NOA1Q8NC60 698 aaKnown RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 OR13H1Q8NG92 308 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 RTP4Q96DX8 246 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 BMFQ96LC9 184 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 IL21RQ9HBE5 538 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 USP29Q9HBJ7 922 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 UBP1Q9NZI7 540 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 FAM153AQ9UHL3 310 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 FNDC3AQ9Y2H6 1198 aaKnown RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 C5orf60A6NFR6 353 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 PMPCBO75439 489 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 RECQL5O94762 991 aaPredicted RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 HNF1BP35680 557 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 TNNT3P45378 269 aaPredicted RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 RABIFP47224 123 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 AGERQ15109 404 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 IRF4Q15306 451 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 ZNF423Q2M1K9 1284 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 P3H1Q32P28 736 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 TEX35Q5T0J7 233 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 KDELC2Q7Z4H8 507 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 JAMLQ86YT9 394 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 TP53I13Q8NBR0 393 aaPredicted RBP20.55■□□□□ 0.88
FOXN3-209ENST00000555353 TADA1Q96BN2 335 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 FCRL5Q96RD9 977 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 ERVMER34-1Q9H9K5 563 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 TM7SF3Q9NS93 570 aa20.55■□□□□ 0.88
FOXN3-209ENST00000555353 CAPN8A6NHC0 703 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 ANKRD66B4E2M5 251 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 F5H423 210 aaPredicted RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 TTI1O43156 1089 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 RAD51CO43502 376 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 KRT14P02533 472 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 ZNF883P0CG24 379 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 LHCGRP22888 699 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 IGFALSP35858 605 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 PTGIRP43119 386 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 ARRB1P49407 418 aaPredicted RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 CCT8P50990 548 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 CDK18Q07002 472 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 SLC14A1Q13336 389 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 GALNT3Q14435 633 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 PTPRRQ15256 657 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 PRAMEF14Q5SWL7 426 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 SPATS2Q86XZ4 545 aaKnown RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 DCP2Q8IU60 420 aaKnown RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 OXR1Q8N573 874 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 SPATA13Q96N96 652 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 ELF4Q99607 663 aaPredicted RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 MLPHQ9BV36 600 aaPredicted RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 RAB17Q9H0T7 212 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 GBA3Q9H227 469 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 MBNL1Q9NR56 388 aaKnown RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 PAK5Q9P286 719 aa20.54■□□□□ 0.88
FOXN3-209ENST00000555353 UTP11Q9Y3A2 253 aaKnown RBP20.54■□□□□ 0.88
FOXN3-209ENST00000555353 CNOT1A5YKK6 2376 aaKnown RBP20.53■□□□□ 0.88
FOXN3-209ENST00000555353 GOLGA8CPA6NN73 597 aa20.53■□□□□ 0.88
FOXN3-209ENST00000555353 PSMD11O00231 422 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms