RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DHRS12A0PJE2 317 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 KCNK1O00180 336 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CLOCKO15516 846 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZBTB24O43167 697 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 DLX3O60479 287 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 DNAJB5O75953 348 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CLPXO76031 633 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CKMT2P17540 419 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 NELFEP18615 380 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 S100A1P23297 94 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 JAK1P23458 1154 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ATP5F1P24539 256 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 MAP4P27816 1152 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CCT8P50990 548 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FOXM1Q08050 763 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 DLG2Q15700 870 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FGD3Q5JSP0 725 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TBCELQ5QJ74 424 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 NAPEPLDQ6IQ20 393 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF773Q6PK81 442 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 USP51Q70EK9 711 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 KLHDC8BQ8IXV7 354 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CBR4Q8N4T8 237 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 DHRSXQ8N5I4 330 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 PCED1BQ96HM7 432 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TSGA13Q96PP4 275 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 AGAP2Q99490 1192 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 APBA2Q99767 749 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 MRPL57Q9BQC6 102 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 MROQ9BYG7 248 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CEP41Q9BYV8 373 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CAB39LQ9H9S4 337 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CSNK1G1Q9HCP0 422 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM105AQ9NUU6 356 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ACTR3BQ9P1U1 418 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 RUVBL2Q9Y230 463 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SHROOM3Q8TF72 1996 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF839A8K0R7 811 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM72CH0Y354 149 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SEC14L2O76054 403 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 JUNP05412 331 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TFPTP0C1Z6 253 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SLC35E2BP0CK96 405 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 UMPSP11172 480 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CDH17Q12864 832 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ITGA7Q13683 1181 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 USP10Q14694 798 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 GRM3Q14832 879 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FSCN1Q16658 493 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 AGKQ53H12 422 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 COQ5Q5HYK3 327 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM72AQ5TYM5 149 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 PM20D1Q6GTS8 502 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM72DQ6L9T8 149 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 KCTD8Q6ZWB6 473 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM72BQ86X60 149 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 METTL23Q86XA0 190 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 EPHX4Q8IUS5 362 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 RNF169Q8NCN4 708 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 ZMIZ2Q8NF64 920 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 HMGCLL1Q8TB92 370 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 PPP1R36Q96LQ0 422 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 CYP2S1Q96SQ9 504 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 PTPN18Q99952 460 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 BCL7BQ9BQE9 202 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TRMOQ9BU70 441 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 YIPF2Q9BWQ6 316 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SEZ6LQ9BYH1 1024 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 WDR12Q9GZL7 423 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TBC1D13Q9NVG8 400 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 TRNAU1APQ9NX07 287 aaKnown RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SMPD3Q9NY59 655 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 PSME2Q9UL46 239 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 SLC39A10Q9ULF5 831 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 NDUFAF1Q9Y375 327 aa10.72□□□□□ -0.69
MTHFD1-210ENST00000555252 RNF103-CHMP3A0A140T963 221 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 MYBPHLA2RUH7 354 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 HHLA1C9JL84 531 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 MBL2P11226 248 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 ODC1P11926 461 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 GMPRP36959 345 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 GRIA3P42263 894 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 RAB10P61026 200 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 PURAQ00577 322 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 OXA1LQ15070 435 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 EGFLAMQ63HQ2 1017 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 CES3Q6UWW8 571 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms