RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TREX1Q9NSU2 369 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 INVSQ9Y283 1065 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 COQ6Q9Y2Z9 468 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 EXOC1LA0A1B0GW35 172 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TLDC2A0PJX2 215 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 MROH6A6NGR9 719 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 H3BQF6 201 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 POLBP06746 335 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ALADP13716 330 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ADRA1DP25100 572 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 GRIA4P48058 902 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 RAD51Q06609 339 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TSTD2Q5T7W7 516 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 AGBL4Q5VU57 503 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 SDE2Q6IQ49 451 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ANO7Q6IWH7 933 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 SYT13Q7L8C5 426 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 PELI3Q8N2H9 469 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
TDP1-211ENST00000555178 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ARL8AQ96BM9 186 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ZNF641Q96N77 438 aaPredicted RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 AGAP2Q99490 1192 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 WRAP53Q9BUR4 548 aaKnown RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 CENPHQ9H3R5 247 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ACSS3Q9H6R3 686 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 MOCS1Q9NZB8 636 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 ZNF711Q9Y462 761 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 PSAT1Q9Y617 370 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 HEATR9A2RTY3 570 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 TMEM221A6NGB7 291 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 M0R296 226 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 VAPBO95292 243 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 SYF2O95926 243 aaKnown RBP10.77□□□□□ -0.68
TDP1-211ENST00000555178 PRNPP04156 253 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 ADRB3P13945 408 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 CA4P22748 312 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 ITGB7P26010 798 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 ABCG1P45844 678 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 ZNF140P52738 457 aaPredicted RBP10.77□□□□□ -0.68
TDP1-211ENST00000555178 SKIDA1Q1XH10 827 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 KRT71Q3SY84 523 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 HSP90AA5PQ58FG0 334 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 EOGTQ5NDL2 527 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 ALS2CLQ60I27 953 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 KIAA1324Q6UXG2 1013 aaKnown RBP10.77□□□□□ -0.68
TDP1-211ENST00000555178 CTAGE3PQ8IX95 158 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 HDDC3Q8N4P3 179 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 TMEM105Q8N8V8 129 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 BRSK1Q8TDC3 778 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 CERS2Q96G23 380 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 RANBP9Q96S59 729 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 OSBPL6Q9BZF3 934 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 MFSD1Q9H3U5 465 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 TBK1Q9UHD2 729 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 PPIL1Q9Y3C6 166 aa10.77□□□□□ -0.68
TDP1-211ENST00000555178 CUL9Q8IWT3 2517 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 C1orf232A0A0U1RR37 186 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PRR23AA6NEV1 266 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 CAPN8A6NHC0 703 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 UPK3BL1B0FP48 263 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 UPK3BL2E5RIL1 263 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 AP3B1O00203 1094 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 NPC1O15118 1278 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 RNASEH2AO75792 299 aaKnown RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 ALDH1A2O94788 518 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 C1SP09871 688 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 ACSL1P33121 698 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PHBP35232 272 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 ARCN1P48444 511 aaKnown RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 PPARDQ03181 441 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PTSQ03393 145 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 LRRC32Q14392 662 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 STARD3Q14849 445 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 SPANXN3Q5MJ09 141 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 LRRC66Q68CR7 880 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 HSD11B1LQ7Z5J1 315 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 RASSF3Q86WH2 238 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 CYP4X1Q8N118 509 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PPM1NQ8N819 430 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 OR4K2Q8NGD2 314 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 NAT14Q8WUY8 206 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 KLK6Q92876 244 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 SCRN2Q96FV2 425 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 MCCC1Q96RQ3 725 aaPredicted RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PAFAH2Q99487 392 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 C20orf96Q9NUD7 363 aaPredicted RBP10.77□□□□□ -0.69
TDP1-211ENST00000555178 FBXL12Q9NXK8 326 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PHTF1Q9UMS5 762 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 FAM169AQ9Y6X4 670 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
TDP1-211ENST00000555178 PIKFYVEQ9Y2I7 2098 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 KNL1Q8NG31 2342 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms