RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CUL1Q13616 776 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SETMARQ53H47 684 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 LYSMD3Q7Z3D4 306 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 TSPAN33Q86UF1 283 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 NRSN1Q8IZ57 195 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 TTC30BQ8N4P2 665 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 FRMD1Q8N878 549 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 LRRC39Q96DD0 335 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 COQ10AQ96MF6 247 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SMIM14Q96QK8 99 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 WRAP53Q9BUR4 548 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 C6orf106Q9H6K1 298 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 PKD2L2Q9NZM6 624 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 NUMA1Q14980 2115 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 IGLON5A6NGN9 336 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 GOLGA8MH3BSY2 632 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 HRO43593 1189 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 LZTS3O60299 673 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 MMP20O60882 483 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 IGHV4-34P06331 123 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 TPH1P17752 444 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 BCKDHBP21953 392 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PSMA3P25788 255 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PTPN5P54829 565 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 ARL4CP56559 192 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 SESN2P58004 480 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PPP2CBP62714 309 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PPP2CAP67775 309 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PTPRRQ15256 657 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 ELF2Q15723 593 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 HIF1AQ16665 826 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PCID2Q5JVF3 399 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 CERCAMQ5T4B2 595 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 ZNF765Q7L2R6 523 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 NLRP8Q86W28 1048 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 EIF1ADQ8N9N8 165 aaKnown RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PPHLN1Q8NEY8 458 aaKnown RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 DTX3LQ8TDB6 740 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 MRM3Q9HC36 420 aaKnown RBP16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 GDF3Q9NR23 364 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 IL17CQ9P0M4 197 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 INVSQ9Y283 1065 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 PKP3Q9Y446 797 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
SPTLC2-203ENST00000554901 EML5Q05BV3 1969 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 PRR23AA6NEV1 266 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 MROH6A6NGR9 719 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 A8MX80 341 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 WNT9AO14904 365 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 EIF3HO15372 352 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 LDB2O43679 373 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 RECQL5O94762 991 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 RHOBTB1O94844 696 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 RHOXF2BP0C7M4 288 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 HADHAP40939 763 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 SPINT3P49223 89 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 PLTPP55058 493 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 DCDC1P59894 354 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 SEMG2Q02383 582 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 POU6F1Q14863 301 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 ACOX1Q15067 660 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 PLK5Q496M5 336 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 SEL1L3Q68CR1 1132 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 PMS2CLQ68D20 193 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 CEP128Q6ZU80 1094 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 CEP68Q76N32 757 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 HSD11B1LQ7Z5J1 315 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 TECPR1Q7Z6L1 1165 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 CCNJLQ8IV13 435 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 FBXO25Q8TCJ0 367 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 STYXQ8WUJ0 223 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 BIRC7Q96CA5 298 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 DTD2Q96FN9 168 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 RHOXF2Q9BQY4 288 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 PIH1D1Q9NWS0 290 aaKnown RBP16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 TCAF1Q9Y4C2 921 aa16.43■□□□□ 0.22
SPTLC2-203ENST00000554901 A0A1W2PPC4 97 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 AURKAO14965 403 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 STX7O15400 261 aaKnown RBP16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 FSBPO95073 299 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 C1SP09871 688 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 MGAT1P26572 445 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 CD27P26842 260 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 DPP6P42658 865 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 DPTQ07507 201 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms