RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SLITRK4Q8IW52 837 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 GPBAR1Q8TDU6 330 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 TMEM74Q96NL1 305 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 ZNF599Q96NL3 588 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 CCNL2Q96S94 520 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 NOD2Q9HC29 1040 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 CYP4F12Q9HCS2 524 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 LRIT1Q9P2V4 623 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 CNOT8Q9UFF9 292 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 SEPT3Q9UH03 358 aa12.24□□□□□ -0.45
MTHFD1-207ENST00000554677 PRSS38A1L453 326 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 NUDT21O43809 227 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 MAFKO60675 156 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 HEXIM1O94992 359 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 FGF1P05230 155 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 CEACAM5P06731 702 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 SKILP12757 684 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 KRT10P13645 584 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 DESP17661 470 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ITIH1P19827 911 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 LHCGRP22888 699 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 PCK1P35558 622 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 RENBPP51606 427 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ZNF135P52742 658 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 TRAF2Q12933 501 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ACOX1Q15067 660 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ASIC2Q16515 512 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ZNF574Q6ZN55 896 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 HSD11B1LQ7Z5J1 315 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 EXD3Q8N9H8 876 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 MED8Q96G25 268 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 TEX101Q9BY14 249 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 STRADBQ9C0K7 418 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 ISCUQ9H1K1 167 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 SEMA6CQ9H3T2 930 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 TMEM63CQ9P1W3 806 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
MTHFD1-207ENST00000554677 A0A0U1RQS6 177 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 CAPN8A6NHC0 703 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 B4DGG1 531 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 B8ZZF3 427 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 AGRPO00253 132 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 SOCS5O75159 536 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 CCNB1P14635 433 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 KELP23276 732 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 IL4RP24394 825 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 VIPR1P32241 457 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 ETV3P41162 512 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 MAZP56270 477 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 IHHQ14623 411 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 SMTNL2Q2TAL5 461 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 ANO6Q4KMQ2 910 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 CCDC183Q5T5S1 534 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 RFLNAQ6ZTI6 216 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 ZNF438Q7Z4V0 828 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 TECPR1Q7Z6L1 1165 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 NUS1Q96E22 293 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 BPIFA3Q9BQP9 254 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 DPEP2Q9H4A9 486 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 WDR26Q9H7D7 661 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 MYO1AQ9UBC5 1043 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 PISDQ9UG56 409 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 PPIL1Q9Y3C6 166 aa12.22□□□□□ -0.45
MTHFD1-207ENST00000554677 PRAMEF33A0A0G2JMD5 474 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 A0A1B0GTH6 734 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 A0A1W2PQC6 194 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 NPIPB15A6NHN6 443 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 C9orf172C9J069 976 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 J3QKU1 62 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 PDE2AO00408 941 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 PRAMEF10O60809 474 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 SOD1P00441 154 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 RARAP10276 462 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 POLD2P49005 469 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 OR1D5P58170 312 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 MAXP61244 160 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 KLHL30Q0D2K2 578 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 NR1I3Q14994 352 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 NR1D2Q14995 579 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 C16orf72Q14CZ0 275 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 BOLA3Q53S33 107 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 Q6ZVL8 140 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
MTHFD1-207ENST00000554677 HEATR4Q86WZ0 1026 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms