RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 THSD1Q9NS62 852 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 SIRPGQ9P1W8 387 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 AMFRQ9UKV5 643 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PADI4Q9UM07 663 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 OR1A2Q9Y585 309 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 TOR1BO14657 336 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 FGF10O15520 208 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 KLK10O43240 276 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 TCEA3O75764 348 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PLA2G2AP14555 144 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 SLC1A1P43005 524 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 LIG3P49916 1009 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PEX5P50542 639 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 AIF1P55008 147 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 TPI1P60174 286 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 ELP6Q0PNE2 266 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 INPP5AQ14642 412 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 AGERQ15109 404 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 RPS6KA1Q15418 735 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 ARHGAP36Q6ZRI8 547 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 ZNF572Q7Z3I7 529 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PEX26Q7Z412 305 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 CLEC14AQ86T13 490 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 DAAM2Q86T65 1068 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 NT5DC3Q86UY8 548 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 SNRNP27Q8WVK2 155 aaKnown RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 OR1E3Q8WZA6 343 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 TTC9Q92623 222 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 NAT6Q93015 286 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PBKQ96KB5 322 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 OSBPL9Q96SU4 736 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 APOOQ9BUR5 198 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 SNRNP25Q9BV90 132 aaKnown RBP10.63□□□□□ -0.71
SHMT2-215ENST00000554656 NUP85Q9BW27 656 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 SLC39A8Q9C0K1 460 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 CATSPERBQ9H7T0 1116 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PARVAQ9NVD7 372 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 AP4E1Q9UPM8 1137 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 ATP8A1Q9Y2Q0 1164 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 PCDHGA8Q9Y5G5 932 aa10.63□□□□□ -0.71
SHMT2-215ENST00000554656 A0A1W2PQM1 296 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 EFCAB8A8MWE9 144 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 D6RAR5 112 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ERVH48-1M5A8F1 160 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 RASGRP1O95267 797 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 PCCBP05166 539 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 XPAP23025 273 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 MAN1A1P33908 653 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 RPIAP49247 311 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 PAPOLAP51003 745 aaKnown RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SUOXP51687 545 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 NDST2P52849 883 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 UCNP55089 124 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SRP54P61011 504 aaKnown RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 CCL7P80098 99 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 CLN3Q13286 438 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 MTM1Q13496 603 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SPIDRQ14159 915 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 BROXQ5VW32 411 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 FOXR1Q6PIV2 292 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 BRAT1Q6PJG6 821 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ENPP7Q6UWV6 458 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SRLQ86TD4 932 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SDR16C5Q8N3Y7 309 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ARL10Q8N8L6 244 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 WDR36Q8NI36 951 aaKnown RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 HCAR2Q8TDS4 363 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 GLMNQ92990 594 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 GRAMD1AQ96CP6 724 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 HES6Q96HZ4 224 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ZNF641Q96N77 438 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 TUBGCP5Q96RT8 1024 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 DPH1Q9BZG8 443 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 FOXP3Q9BZS1 431 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 DHX35Q9H5Z1 703 aaKnown RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 SYNDIG1Q9H7V2 258 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 FGF22Q9HCT0 170 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 GULP1Q9UBP9 304 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 GPR34Q9UPC5 381 aa10.62□□□□□ -0.71
SHMT2-215ENST00000554656 ZFC3H1O60293 1989 aaKnown RBP10.62□□□□□ -0.71
SHMT2-215ENST00000554656 CCDC187A0A096LP49 1063 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 UQCRHLA0A096LP55 91 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CCDC66A2RUB6 948 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 TMEM202A6NGA9 273 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 TMEM110-MUSTN1A8MSY1 372 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 MYO1FO00160 1098 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 EEF2KO00418 725 aaKnown RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 NOBOXO60393 691 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 TNFSF15O95150 251 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 FTCDO95954 541 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 UQCRHP07919 91 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CTNNA2P26232 953 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms