RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 APOL3O95236 402 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ATP1A1P05023 1023 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 CELA3BP08861 270 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 IRF1P10914 325 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TNNT1P13805 278 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 DESP17661 470 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 CCR1P32246 355 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 CTNNA1P35221 906 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ADRA1BP35368 520 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 GJC1P36383 396 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ADCY8P40145 1251 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 COG7P83436 770 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ITKQ08881 620 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 SCAPQ12770 1279 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 FAPQ12884 760 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TRIM25Q14258 630 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 CA9Q16790 459 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 HADHQ16836 314 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 SMTNL2Q2TAL5 461 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 BOLA3Q53S33 107 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 KCNT1Q5JUK3 1230 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 FAM78AQ5JUQ0 283 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ERMARDQ5T6L9 678 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 DCAF12L1Q5VU92 463 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 NADSYN1Q6IA69 706 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 SYT10Q6XYQ8 523 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 GET4Q7L5D6 327 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 POLNQ7Z5Q5 900 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF761Q86XN6 746 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ARID3BQ8IVW6 561 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF683Q8IZ20 524 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 PYROXD2Q8N2H3 581 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ADAMTS17Q8TE56 1095 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 RAPGEF5Q92565 580 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 NTAN1Q96AB6 310 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 RSPRY1Q96DX4 576 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 LRRC3BQ96PB8 259 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 HAPLN3Q96S86 360 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 NACA2Q9H009 215 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TKTL2Q9H0I9 626 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 WDCPQ9H6R7 721 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ZWILCHQ9H900 591 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TRPV4Q9HBA0 871 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TDP1Q9NUW8 608 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 KLHL11Q9NVR0 708 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 TMEM51Q9NW97 253 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 GDE1Q9NZC3 331 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 DNAI1Q9UI46 699 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 MAGEL2Q9UJ55 1249 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 CDH7Q9ULB5 785 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 FZD10Q9ULW2 581 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 JRKLQ9Y4A0 524 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 SNX10Q9Y5X0 201 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 COL6A3P12111 3177 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 A0A0A6YYJ9 748 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CTAGE9A4FU28 777 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 C3orf70A6NLC5 250 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 MIF4GDA9UHW6 222 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 PI4K2BG5E9Z4 385 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM72CH0Y354 149 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 ACSL4O60488 711 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CYP7B1O75881 506 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 MOCS2O96007 188 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 APOEP02649 317 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 KRT7P08729 469 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CD48P09326 243 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 SLC2A3P11169 496 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FCARP24071 287 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CORO1AP31146 461 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 AVPR1AP37288 418 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 VIPR2P41587 438 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 DNA2P51530 1060 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 AIF1P55008 147 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 SEMA3BQ13214 749 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 KLF1Q13351 362 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 EIF4HQ15056 248 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 RPS6KA1Q15418 735 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF77Q15935 545 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 DPYSL2Q16555 572 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 TAZQ16635 292 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM133BQ5BKY9 247 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 ZFYVE27Q5T4F4 411 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM72AQ5TYM5 149 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 MANEALQ5VSG8 457 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 PAPD7Q5XG87 772 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 NUGGCQ68CJ6 796 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM72DQ6L9T8 149 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 TIGD7Q6NT04 549 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 AADACL2Q6P093 401 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 HTR3DQ70Z44 454 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 ANKS1BQ7Z6G8 1248 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 C14orf80Q86SX3 495 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM72BQ86X60 149 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 PSTKQ8IV42 348 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 UNC45BQ8IWX7 931 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 RHOT1Q8IXI2 618 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms