RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 THBS2P35442 1172 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 GATMP50440 423 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 RAB27AP51159 221 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 CACNA2D1P54289 1103 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TAS2R40P59535 323 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 NOP14P78316 857 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ASPHQ12797 758 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 PDK2Q15119 407 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 STILQ15468 1287 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 GPR19Q15760 415 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 SLC5A9Q2M3M2 681 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 KHDC1Q4VXA5 237 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 XKR3Q5GH77 459 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 FSCBQ5H9T9 825 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 FSTL4Q6MZW2 842 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TMEM270Q6UE05 265 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TIFABQ6ZNK6 161 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 SLC24A5Q71RS6 500 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 DGLUCYQ7Z3D6 616 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ZC3H18Q86VM9 953 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 LRRC6Q86X45 466 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 MYLK4Q86YV6 388 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 HACE1Q8IYU2 909 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 C4orf33Q8N1A6 199 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF276Q8N554 614 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 UBR7Q8N806 425 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TDRD5Q8NAT2 981 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 MCUQ8NE86 351 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 MIPOL1Q8TD10 442 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF606Q8WXB4 792 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 IRGQQ8WZA9 623 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 CPT1BQ92523 772 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 RTP4Q96DX8 246 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 CMTM5Q96DZ9 223 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TOE1Q96GM8 510 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 CEP170P1Q96L14 293 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 FERMT1Q9BQL6 677 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 RTP3Q9BQQ7 232 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 FAM213AQ9BRX8 229 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 FAM167BQ9BTA0 163 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 HEMGNQ9BXL5 484 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 MAK16Q9BXY0 300 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 DNAI2Q9GZS0 605 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 KLC2Q9H0B6 622 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 POMKQ9H5K3 350 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ELAC1Q9H777 363 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 XAB2Q9HCS7 855 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 SLCO1B3Q9NPD5 702 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 RGS18Q9NS28 235 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 CATSPERZQ9NTU4 200 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 THAP1Q9NVV9 213 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ASNSD1Q9NWL6 643 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TMEM161AQ9NX61 479 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TAS2R1Q9NYW7 299 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 RBAKQ9NYW8 714 aaPredicted RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 DLGAP2Q9P1A6 1054 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 XPO7Q9UIA9 1087 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 MID2Q9UJV3 735 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 ITGA11Q9UKX5 1188 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 KIAA1257Q9ULG3 409 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 APOBEC2Q9Y235 224 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 C2CD2Q9Y426 696 aa6.01□□□□□ -1.45
VPS33B-203ENST00000554264 TNPO3Q9Y5L0 923 aaKnown RBP6.01□□□□□ -1.45
VPS33B-203ENST00000554264 C5orf42Q9H799 3197 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 SMIM35A0A1B0GVV1 85 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 DYTNA2CJ06 578 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 GOLGA8IPA6NC78 632 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 GOLGA8JA6NMD2 632 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 HIDE1A8MVS5 230 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CAPN14A8MX76 684 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CREB3O43889 395 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 MAFKO60675 156 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ASS1P00966 412 aaKnown RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 MLNP12872 115 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 P4HA1P13674 534 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 CPA3P15088 417 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 GM2AP17900 193 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TPSB2P20231 275 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TGM2P21980 687 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PRKCHP24723 683 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 SERPINB3P29508 390 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ADSLP30566 484 aaPredicted RBP6□□□□□ -1.45
VPS33B-203ENST00000554264 CRHR1P34998 444 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 RPS6KA3P51812 740 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PRKAA2P54646 552 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ITGA1P56199 1179 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 GPX6P59796 221 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ROR1Q01973 937 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 MED21Q13503 144 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF460Q14592 562 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 PUM1Q14671 1186 aaKnown RBP eCLIP6□□□□□ -1.45
VPS33B-203ENST00000554264 ANGPT1Q15389 498 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 TPSAB1Q15661 275 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 MAPK6Q16659 721 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 KYAT1Q16773 422 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 INSCQ1MX18 579 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 WDR72Q3MJ13 1102 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ACSBG2Q5FVE4 666 aa6□□□□□ -1.45
VPS33B-203ENST00000554264 ATAT1Q5SQI0 421 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms