RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HMX3A6NHT5 357 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 UNC119BA6NIH7 251 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM200CA6NKL6 621 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SRRM3A6NNA2 597 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 MARCH11A6NNE9 402 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 M0QZ92 97 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 M0QZQ0 153 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ZBTB43O43298 467 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 EXTL3O43909 919 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 DHX16O60231 1041 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 MED24O75448 989 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PRAMEF12O95522 483 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ONECUT2O95948 504 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PEX11BO96011 259 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 GLUD1P00367 558 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RHOP08100 348 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF806P0C7X5 589 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 HMGA1P17096 107 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RBL1P28749 1068 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 AXLP30530 894 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 NTSR1P30989 418 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PTGS2P35354 604 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 LIPAP38571 399 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 MAGEA9P43362 315 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 GSTM5P46439 218 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 QARSP47897 775 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 JAK3P52333 1124 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 NAPAP54920 295 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TIRAPP58753 221 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ARHGAP8P85298 464 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TIAL1Q01085 375 aaKnown RBP eCLIP2.52□□□□□ -2.019e-11■■■■■ 59.7
CPSF6-207ENST00000551516 SETQ01105 290 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SCAPQ12770 1279 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 EIF2B5Q13144 721 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CLCA4Q14CN2 919 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 USP41Q3LFD5 358 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 NRN1LQ496H8 165 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SOWAHCQ53LP3 525 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 STXBP5Q5T5C0 1151 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 LRCH2Q5VUJ6 765 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SLC9A4Q6AI14 798 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PCSK4Q6UW60 755 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CLEC9AQ6UXN8 241 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 DBX2Q6ZNG2 339 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RAB11FIP2Q7L804 512 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 MOGAT3Q86VF5 341 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CAND1Q86VP6 1230 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 WDR5BQ86VZ2 330 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CDR2LQ86X02 465 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PALB2Q86YC2 1186 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RHPN2Q8IUC4 686 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SLC44A2Q8IWA5 706 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SPEM1Q8N4L4 309 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 METTL13Q8N6R0 699 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 C11orf44Q8N8P7 122 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TEX19Q8NA77 164 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RNF149Q8NC42 400 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 TOR1AIP2Q8NFQ8 470 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 MBD3L2Q8NHZ7 208 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 IL17DQ8TAD2 202 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SLC30A5Q8TAD4 765 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 OLIG1Q8TAK6 271 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SUN3Q8TAQ9 357 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 STT3BQ8TCJ2 826 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ATG4AQ8WYN0 398 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 DNASE1L2Q92874 299 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 EXTL1Q92935 676 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 USP13Q92995 863 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 DVL3Q92997 716 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 C3orf49Q96BT1 292 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SDCCAG3Q96C92 435 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC51Q96ER9 411 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 CPB2Q96IY4 423 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 VPS50Q96JG6 964 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 UBXN10Q96LJ8 280 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 FAM20AQ96MK3 541 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 C8orf49Q96NF6 230 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PLEKHG4BQ96PX9 1271 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PYM1Q9BRP8 204 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ALG8Q9BVK2 526 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 STRA6Q9BX79 667 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 BRD8Q9H0E9 1235 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 GLT8D2Q9H1C3 349 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PABPC3Q9H361 631 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 HPS4Q9NQG7 708 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 NRBP2Q9NSY0 501 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ANKEF1Q9NU02 776 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 RBM28Q9NW13 759 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SMPD4Q9NXE4 827 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 EHD3Q9NZN3 535 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF69Q9UC07 566 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 FBXL5Q9UKA1 691 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 NFU1Q9UMS0 254 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PIN4Q9Y237 131 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 DRG1Q9Y295 367 aaKnown RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SLC27A6Q9Y2P4 619 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 PRG3Q9Y2Y8 225 aaPredicted RBP2.52□□□□□ -2.01
CPSF6-207ENST00000551516 KNL1Q8NG31 2342 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 VWA8A3KMH1 1905 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms