RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ARHGEF17Q96PE2 2063 aaPredicted RBP23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 FLNBO75369 2602 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 A0A1W2PQC6 194 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 H3BRJ5 948 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 GZMAP12544 262 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 CCNB1P14635 433 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 FILIP1LQ4L180 1135 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 ZDHHC1Q8WTX9 485 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 SPOCK2Q92563 424 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 LGR4Q9BXB1 951 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 TRNAU1APQ9NX07 287 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 TAS2R14Q9NYV8 317 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 B4GALT6Q9UBX8 382 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 CNOT8Q9UFF9 292 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 PHTF1Q9UMS5 762 aa23.1■■□□□ 1.29
SMARCD1-209ENST00000550477 EFSO43281 561 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 FTLP02792 175 aaPredicted RBP23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 ALDH4A1P30038 563 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 VIPR1P32241 457 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 KCNC4Q03721 635 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 ASIC2Q16515 512 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 RALGPS1Q5JS13 557 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 DENND2CQ68D51 928 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 TMCO3Q6UWJ1 677 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 GPBAR1Q8TDU6 330 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 USP7Q93009 1102 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 COQ10AQ96MF6 247 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 CLMPQ9H6B4 373 aa23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 CWC15Q9P013 229 aaKnown RBP23.09■■□□□ 1.29
SMARCD1-209ENST00000550477 PRAMEF33A0A0G2JMD5 474 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 GOLGA6CA6NDK9 693 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 GOLGA6BA6NDN3 693 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 PSMD11O00231 422 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 ATMINO43313 823 aaPredicted RBP23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 PRAMEF10O60809 474 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 CPP00450 1065 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 GOLGA6DP0CG33 693 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 MYBL1P10243 752 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 ITIH1P19827 911 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 SLC10A7Q0GE19 358 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 TGIF1Q15583 401 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 AMZ1Q400G9 498 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 BOLA3Q53S33 107 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 ARHGAP36Q6ZRI8 547 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 NYAP1Q6ZVC0 841 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 NPWQ8N729 165 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 CCDC112Q8NEF3 446 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 NUDCD1Q96RS6 583 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 PEBP4Q96S96 227 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 SUDS3Q9H7L9 328 aaPredicted RBP23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 GOLGA6AQ9NYA3 693 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 PCDHGC4Q9Y5F7 938 aa23.08■■□□□ 1.29
SMARCD1-209ENST00000550477 HGSO14964 777 aaPredicted RBP23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 HTRA2O43464 458 aaPredicted RBP23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 SERPINB6P35237 376 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 PCK1P35558 622 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 GPR3P46089 330 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 NFATC3Q12968 1075 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 KCTD16Q68DU8 428 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 USP45Q70EL2 814 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 PRICKLE2Q7Z3G6 844 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 HEATR4Q86WZ0 1026 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 SLITRK4Q8IW52 837 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 ARFGAP1Q8N6T3 406 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 CCL4L1Q8NHW4 92 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 ZNF653Q96CK0 615 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 TEX101Q9BY14 249 aa23.07■■□□□ 1.28
SMARCD1-209ENST00000550477 LRRC53A6NM62 1247 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 AGRPO00253 132 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 HEXIM1O94992 359 aaKnown RBP23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 TEAD1P28347 426 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 GNPDA1P46926 289 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 B4GALNT1Q00973 533 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 DPYSQ14117 519 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 CNGA3Q16281 694 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 RAET1GQ6H3X3 334 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 DPYSL5Q9BPU6 564 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 HAUS4Q9H6D7 363 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 SPATS2LQ9NUQ6 558 aaKnown RBP23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 HAUS2Q9NVX0 235 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 TAAR2Q9P1P5 351 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 SCN8AQ9UQD0 1980 aa23.06■■□□□ 1.28
SMARCD1-209ENST00000550477 LRCH4O75427 683 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 FGF1P05230 155 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 CEACAM5P06731 702 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 ATP1A2P50993 1020 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 CDH6P55285 790 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 CDK3Q00526 305 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 KLHL30Q0D2K2 578 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 TRA2AQ13595 282 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 ARMC12Q5T9G4 340 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 MARC1Q5VT66 337 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 ZFAND4Q86XD8 727 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 ATPAF2Q8N5M1 289 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 DTD2Q96FN9 168 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 SCRN2Q96FV2 425 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 SYT11Q9BT88 431 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 CDH19Q9H159 772 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 SEMA6CQ9H3T2 930 aa23.05■■□□□ 1.28
SMARCD1-209ENST00000550477 RDH14Q9HBH5 336 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms