RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 CCDC3Q9BQI4 270 aa19.55■□□□□ 0.72
ATF1-202ENST00000549612 LGR4Q9BXB1 951 aa19.55■□□□□ 0.72
ATF1-202ENST00000549612 POLR1EQ9GZS1 481 aaKnown RBP19.55■□□□□ 0.72
ATF1-202ENST00000549612 ZNHIT6Q9NWK9 470 aaKnown RBP19.55■□□□□ 0.72
ATF1-202ENST00000549612 GULP1Q9UBP9 304 aa19.55■□□□□ 0.72
ATF1-202ENST00000549612 AMACRQ9UHK6 382 aa19.55■□□□□ 0.72
ATF1-202ENST00000549612 GPR34Q9UPC5 381 aa19.55■□□□□ 0.72
ATF1-202ENST00000549612 PDE2AO00408 941 aaPredicted RBP19.54■□□□□ 0.72
ATF1-202ENST00000549612 MATN3O15232 486 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 FZD6O60353 706 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 MYCLP1P12525 358 aaPredicted RBP19.54■□□□□ 0.72
ATF1-202ENST00000549612 CCNCP24863 283 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 IGF2-ASQ6U949 168 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 LRRC69Q6ZNQ3 347 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 USP45Q70EL2 814 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 HSD11B1LQ7Z5J1 315 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 PQLC3Q8N755 202 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 ZNF578Q96N58 590 aaPredicted RBP19.54■□□□□ 0.72
ATF1-202ENST00000549612 TSPY26PQ9H489 355 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 MRPL40Q9NQ50 206 aaKnown RBP19.54■□□□□ 0.72
ATF1-202ENST00000549612 ABHD10Q9NUJ1 306 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 SIRPGQ9P1W8 387 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 ENTPD2Q9Y5L3 495 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 RAI2Q9Y5P3 530 aa19.54■□□□□ 0.72
ATF1-202ENST00000549612 NTN3O00634 580 aaPredicted RBP19.53■□□□□ 0.72
ATF1-202ENST00000549612 AKR1B10O60218 316 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 MFAP3LO75121 409 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 PDHA1P08559 390 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 TPM1P09493 284 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 MX2P20592 715 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 CES1P23141 567 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 ITPKBP27987 946 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 TEAD1P28347 426 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 ETV3P41162 512 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 PDX1P52945 283 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 GBE1Q04446 702 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 TSPAN33Q86UF1 283 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 GPR156Q8NFN8 814 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 OR6C4Q8NGE1 309 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 CCDC74AQ96AQ1 378 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 ATXN7L3BQ96GX2 97 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 CRELD1Q96HD1 420 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 HIC2Q96JB3 615 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 TEX101Q9BY14 249 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 PHPT1Q9NRX4 125 aaPredicted RBP19.53■□□□□ 0.72
ATF1-202ENST00000549612 SHROOM3Q8TF72 1996 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 PTPRQQ9UMZ3 2332 aa19.53■□□□□ 0.72
ATF1-202ENST00000549612 A0A1W2PNU3 283 aaPredicted RBP19.52■□□□□ 0.72
ATF1-202ENST00000549612 PRSS38A1L453 326 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 ZNF487B1APH4 448 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 CASC3O15234 703 aaKnown RBP19.52■□□□□ 0.72
ATF1-202ENST00000549612 MAP3K6O95382 1288 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 KRT10P13645 584 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 HOXB3P14651 431 aaPredicted RBP19.52■□□□□ 0.72
ATF1-202ENST00000549612 ERVPABLB-1P60509 514 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 ARHGEF7Q14155 803 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 IHHQ14623 411 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 PTPRRQ15256 657 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 TSR1Q2NL82 804 aaKnown RBP19.52■□□□□ 0.72
ATF1-202ENST00000549612 DENND2CQ68D51 928 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 OGFOD3Q6PK18 319 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 Q6ZVL8 140 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 TECPR1Q7Z6L1 1165 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 HEATR4Q86WZ0 1026 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 SLC35G2Q8TBE7 412 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 RAPGEF5Q92565 580 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 HDAC11Q96DB2 347 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 TMEM168Q9H0V1 697 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 CYP4F12Q9HCS2 524 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 ASCL3Q9NQ33 180 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 HAUS2Q9NVX0 235 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 RBM22Q9NW64 420 aaKnown RBP eCLIP19.52■□□□□ 0.72
ATF1-202ENST00000549612 RABGEF1Q9UJ41 708 aa19.52■□□□□ 0.72
ATF1-202ENST00000549612 MTA2O94776 668 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 CCNB1P14635 433 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 CTPS1P17812 591 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 KDELR1P24390 212 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 ARHGAP25P42331 645 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 PCBP4P57723 403 aaKnown RBP19.51■□□□□ 0.71
ATF1-202ENST00000549612 CDK3Q00526 305 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 DSC2Q02487 901 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 DPTQ07507 201 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 ITKQ08881 620 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 SLC10A2Q12908 348 aaPredicted RBP19.51■□□□□ 0.71
ATF1-202ENST00000549612 SPIDRQ14159 915 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 MESDQ14696 234 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 TAF8Q7Z7C8 310 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 VSIG1Q86XK7 387 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 NDUFAF2Q8N183 169 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 ARRDC2Q8TBH0 407 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 CCDC42Q96M95 316 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 RNF157Q96PX1 679 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 CHP1Q99653 195 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 TDRD1Q9BXT4 1180 aaKnown RBP19.51■□□□□ 0.71
ATF1-202ENST00000549612 FRMD8Q9BZ67 464 aaPredicted RBP19.51■□□□□ 0.71
ATF1-202ENST00000549612 NHEJ1Q9H9Q4 299 aaPredicted RBP19.51■□□□□ 0.71
ATF1-202ENST00000549612 SPTLC3Q9NUV7 552 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 DTLQ9NZJ0 730 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 SATB2Q9UPW6 733 aa19.51■□□□□ 0.71
ATF1-202ENST00000549612 PCDHGA8Q9Y5G5 932 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms